labtech

GitHub - Documentation

Labtech makes it easy to define multi-step experiment pipelines and run them with maximal parallelism and result caching:

• Defining tasks is simple; write a class with a single run() method and parameters as dataclass-style attributes.
• Flexible experiment configuration; simply create task objects for all of your parameter permutations.
• Handles pipelines of tasks; any task parameter that is itself a task will be executed first and make its result available to its dependent task(s).
• Implicit parallelism; Labtech resolves task dependencies and runs tasks in sub-processes with as much parallelism as possible.
• Implicit caching and loading of task results; configurable and extensible options for how and where task results are cached.
• Integration with mlflow; Automatically log task runs to mlflow with all of their parameters.

Installation

pip install labtech

Usage

from time import sleep

import labtech

# Decorate your task class with @labtech.task:
@labtech.task
class Experiment:
    # Each Experiment task instance will take `base` and `power` parameters:
    base: int
    power: int

    def run(self) -> int:
        # Define the task's run() method to return the result of the experiment:
        labtech.logger.info(f'Raising {self.base} to the power of {self.power}')
        sleep(1)
        return self.base ** self.power

def main():
    # Configure Experiment parameter permutations
    experiments = [
        Experiment(
            base=base,
            power=power,
        )
        for base in range(5)
        for power in range(5)
    ]

    # Configure a Lab to run the experiments:
    lab = labtech.Lab(
        # Specify a directory to cache results in (running the experiments a second
        # time will just load results from the cache!):
        storage='demo_lab',
        # Control the degree of parallelism:
        max_workers=5,
    )

    # Run the experiments!
    results = lab.run_tasks(experiments)
    print([results[experiment] for experiment in experiments])

if __name__ == '__main__':
    main()

Labtech can also produce graphical progress bars in Jupyter notebooks:

Tasks parameters can be any of the following types:

• Simple scalar types: str, bool, float, int, None
• Collections of any of these types: list, tuple, dict, Enum
• Task types: A task parameter is a "nested task" that will be executed before its parent so that it may make use of the nested result.

Here's an example of defining a single long-running task to produce a result for a large number of dependent tasks:

from time import sleep

import labtech

@labtech.task
class SlowTask:
    base: int

    def run(self) -> int:
        sleep(5)
        return self.base ** 2

@labtech.task
class DependentTask:
    slow_task: SlowTask
    multiplier: int

    def run(self) -> int:
        return self.multiplier * self.slow_task.result

def main():
    some_slow_task = SlowTask(base=42)
    dependent_tasks = [
        DependentTask(
            slow_task=some_slow_task,
            multiplier=multiplier,
        )
        for multiplier in range(10)
    ]

    lab = labtech.Lab(storage='demo_lab')
    results = lab.run_tasks(dependent_tasks)
    print([results[task] for task in dependent_tasks])

if __name__ == '__main__':
    main()

Labtech can even generate a Mermaid diagram to visualise your tasks:

from labtech.diagram import display_task_diagram

some_slow_task = SlowTask(base=42)
dependent_tasks = [
    DependentTask(
        slow_task=some_slow_task,
        multiplier=multiplier,
    )
    for multiplier in range(10)
]

display_task_diagram(dependent_tasks)

classDiagram
    direction BT

    class DependentTask
    DependentTask : SlowTask slow_task
    DependentTask : int multiplier
    DependentTask : run() int

    class SlowTask
    SlowTask : int base
    SlowTask : run() int

    DependentTask <-- SlowTask: slow_task

To learn more, dive into the following resources:

• The labtech tutorial (as an interactive notebook)
• Cookbook of common patterns (as an interactive notebook)
• API reference for Labs and Tasks
• More options for cache formats and storage providers
• Diagramming tools
• More examples

Mypy Plugin

For mypy type-checking of classes decorated with labtech.task, simply enable the labtech mypy plugin in your mypy.ini file:

[mypy]
plugins = labtech.mypy_plugin

Contributing

• Install Poetry dependencies with make deps
• Run linting, mypy, and tests with make check
• Documentation:
  • Run local server: make docs-serve
  • Build docs: make docs-build
  • Deploy docs to GitHub Pages: make docs-github
  • Docstring style follows the Google style guide