bentley-historical-library / bhl_born_digital_utils

Scripts used for removable media transfers at the Bentley Historical Library
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BHL Born-digital Utilities

Scripts and templates used for born-digital transfers at the Bentley Historical Library. These utilities are primarily used to assist in the transfer of materials from removable media using the BHL's Removable Media Workstations (RMWs) and RipStation.

Requirements

Installation

pip install git+https://github.com/bentley-historical-library/bhl_born_digital_utils.git

bhl_inventory.csv

A tracking template used for born-digital transfers at the Bentley Historical Library. Many of the utilities detailed below rely on the bhl_inventory.csv. See README for bhl_inventory.csv.

bhl_bd_utils.py

This script serves as the entry point to various born-digital transfer utilities. A summary of the script's usage and available actions are below, followed by detailed instructions for each utility. All utilities require, at minimum, an accession number, corresponding to a directory with transferred removable media items, and an action.

Usage: bhl_bd_utils.py ACCESSION_NUMBER action [options]

Action Description
-c, --create_transfer Create a RMW transfer
-e, --empty Check for empty folders and files
-m, --missing Check for missing barcodes and folders
-o, --osfiles Check for and delete system files and directories
-s, --structure Check RipStation output structure
-u, --unhide Unhide folders (Windows workstations only)
-b, --bulkextractor Run bulk_extractor
--copy Copy accession from RMW
--move_separations Move separations
--av_media Separate AV media
--rename_files Rename files with invalid characters
--dips Make DIPs for audio CDs and video DVDs
--split_transfer Split transfer into smaller chunks
--brunnhilde Run Brunnhilde

BHL Born Digital Utils Configuration

Many of born-digital transfer utilities make use of a .bhl_bd_utils configuration file in the current user's home directory. If a configuration file does not exist, the utility will prompt you to create one. The available settings are detailed below.

Setting Description
input Directory where accession directories can be found. This should be a local directory.
logs Directory where various program logs will be stored
destination Directory where accessions will be copied to from the RMW
separations Directory where separations will be moved
webcam_dir Directory where images are saved by the RMW's webcam
handbrake Full path to an installed HandBrake CLI executable
handbrake_preset Full path to a HandBrake preset JSON file
ffmpeg Full path to an installed FFmpeg executable
bulk_extractor Full path to an installed bulk_extractor executable
brunnhilde Directory where Brunnhilde reports will be stored

Some of these settings can be overriden from the command line. For example, an -i flag can be passed along with the path to a directory to override the configured input directory. Below are the optional arguments that can be passed to bhl_bd_utils.py and the configuration default that they override.

Argument Help
-i, --input Override input
-d, --destination Override destination
-l, --logs Override logs
--separations_dir Override separations

By default, bhl_bd_utils.py assumes that the scripts are being run on transfers on a local RMW directory. In some cases, these scripts may be run on a transfer after it has been copied to the remote destination directory. Passing a --base remote will override the default behavior and use the configured destination directory as the input directory.

Create a RMW transfer

Creates accession and barcode directories, bhl_metadata, and bhl_notices directories within the configured input directory.

Requirements:

bhl_bd_utils.py ACCESSION_NUMBER -c/--create_transfer [--metadata_off] [--notices_off]

Argument Help
ACCESSION_NUMBER The accession number
-c, --create_transfer Create a RMW transfer
--metadata_off Turn off creating bhl_metadata directory inside barcode folders
--notices_off Turn off creating bhl_notices inside accession folder

Acknowledgments: This utility is developed based on CollectionSetup.exe by Matt Adair.

Check for empty folders and files

Checks for empty directories and 0-byte files in a source directory and prints the results to the terminal

bhl_bd_utils.py ACCESSION_NUMBER -e/--empty

Argument Help
ACCESSION_NUMBER The accession number
-e, --empty Check for empty folders and files

Check for missing barcodes and folders

Parses the bhl_inventory.csv and subdirectories for a source directory, compares the results, and lists barcodes that are in the bhl_inventory.csv but not in the source directory and subdirectories in the source directory that are not accounted for in the bhl_inventory.csv

bhl_bd_utils.py ACCESSION_NUMBER -m/--missing

Argument Help
ACCESSION_NUMBER The accession number
-m, --missing Check for missing barcodes and folders

Check for and delete system files and directories

Checks for and deletes operating system files and directories in a source path. Operating system files checked include Thumbs.db, .DS_Store, Desktop DB, and Desktop DF. Operating system directories checked include .Trashes, .Spotlight-V100, and .fseventsd. The script will print all found files and directories to the terminal to confirm deletion. Optional arguments can turn off deleting Thumbs.db, .DS_Store, Desktop DB/DF, and directories (.Trashes, .Spotlight-V100, and .fseventsd).

bhl_bd_utils.py ACCESSION_NUMBER -o/--osfiles [--thumbsdb_off] [--dsstore_off] [--desktopdbdf_off] [--dirs_off]

Argument Help
ACCESSION_NUMBER The accession number
-o, --osfiles Check for and delete system files
--thumbsdb_off Turn off deleting Thumbs.db files
--dsstore_off Turn off deleting .DS_Store files
--desktopdbdf_off Turn off deleting Desktop DB and Desktop DF files
--dirs_off Turn off deleting .Trashes, .Spotlight-V100, and .fseventsd folders

Check RipStation output structure

Checks RipStation output structure, including checking to ensure that .mp4 and .wav DIPs have been made for video DVDs and audio CDs, respectively, that photos of removable media exist when applicable, and that .wav and .mp4 files are valid. Optional arguments can turn off validating .wav and .mp4 files.

Requirements: This script uses ffmpeg to validate .wav and .mp4 files.

bhl_bd_utils.py ACCESSION_NUMBER -s/--structure [--validation_off]

Argument Help
ACCESSION_NUMBER The accession number
--validation_off Turn off validating .wav (audio CDs) and .mp4 (video DVDs)

Unhide folders

Unhide hidden sub-directories in a directory. Note: This removes the Windows -H (hidden) and -S (system) attributes from directories, and as such is only applicable on Windows machines.

bhl_bd_utils.py ACCESSION_NUMBER -u/--unhide

Argument Help
ACCESSION_NUMBER The accession number
-u, --unhide Unhide folders

Run bulk_extractor

This script will run bulk_extractor from the command line. Currently, scanning for exif metadata generated from images is turned off, and bulk_extractor will use its accts scanner to search for PII such as Social Security numbers, credit card numbers, telephone numbers, and email addresses. Reports generated by bulk_extractor will be stored in the configured logs directory. In order to save time, resources, and to avoid false positives, bulk_extractor is not run on audio CDs or video DVDs. bulk_extractor reports are stored in subdirectories for each piece of removable media scanned. Following scanning, all empty reports are deleted, leaving only reports that had one or more hit. On Windows machines, the utility uses the bulk_extractor configuraiton setting, corresponding to an exact path to a bulk_extract executable, and on other operating systems assumes that bulk_extractor is available on the system path.

bhl_bd_utils.py ACCESSION_NUMBER -b/--bulkextractor

Argument Help
ACCESSION_NUMBER The accession number
-b, --bulkextractor Run bulk_extractor

Copy accession from RMW

This utility copies a directory using robocopy (on Windows) or rsync (on other operating systems). Its primary purpose is to copy accessions from a removable media workstation to a network storage location. It uses the configured defaults for input and destination, but can optionally be overriden by passing either an -i and/or -d argument. This utility will create a log file of the form [accession_number]_[timestamp].txt in the configured logs directory.

bhl_bd_utils.py ACCESSION_NUMBER --copy

Argument Help
ACCESSION_NUMBER The accession number
--copy Copy accession from RMW

Move separations

This utility moves separated directories to the configured separations directory. The script parses the bhl_inventory.csv in a given source directory to identify media that has been marked as separated by a separation column with a value of y, and then moves the _barcode directory from within the source directory to an [accession]_separations directory in the given destination. It optionally takes a --separations_dir argument to override the configured separations directory.

bhl_bd_utils.py ACCESSION_NUMBER --move_separations

Argument Help
ACCESSION_NUMBER The accession number
--move_separations Move separations

Separate AV media

This utility moves audio-formatted CDs and video-formatted DVDs into their own directory so that AV content can be processed using Archivematica's automation-tools and data content can be sent to Archivematica's backlog. The script parses the bhl_inventory.csv in a given source directory to identify media with a media_type that begins with audio or video and then moves those barcode directories into a new directory named [accession]_audiovisual in the source directory's parent directory. For example, given a source directory of /path/to/source/1234, the script will move audiovisual media into /path/to/source/1234_audiovisual.

bhl_bd_utils.py ACCESSION_NUMBER --av_media [-a/-accession ACCESSION]

Argument Help
ACCESSION_NUMBER The accession number
--av_media Separate AV media

Rename files

This utility replaces 'invalid' characters in a filename with an underscore. The script is based heavily off of Archivematica's sanitize_names.py. The rename_files utility allows several more characters in a filename than Archivematica, as its primary use case is to resolve issues with running bagit.py on directories that contain files with certain invalid characters. The utility prints out a list of files that will be renamed and asks for confirmation. This script should be used sparingly, and only after bagging attempts on Windows and Linux filesystems have failed.

bhl_bd_utils.py ACCESSION_NUMBER --rename_files

Argument Help
ACCESSION_NUMBER The accession number
--rename_files Rename files

Make DIPs

This utility makes access derivatives (DIPs) for audio CDs and video DVDs to be uploaded to the Bentley Digital Media Library. Its primary use case is to make DIPs in batch for media transferred using the RipStation, but can also be used for media transferred using the RMWs. The utility parses the bhl_inventory.csv in a given accession directory to identify all audio CDs and video DVDs that have (1) been successfully transferred and (2) do not have an existing access derivative. The utility then does the following depending on the media type:

bhl_bd_utils.py ACCESSION_NUMBER --dips

Argument Help
ACCESSION_NUMBER The accession number
--dips Make DIPs

Split Transfer

This utility splits a transfer into multiple smaller chunks. This is especially useful for transfer with more than 10,000 files, which can cause problems in Archivematica. The utility counts the number of files in each item within a transfer and then moves items into directories of fewer than the split size, which defaults to 5,000 files and can be modified by passing a --split_size parameter. The utility keeps individual items whole (i.e., it will not move some subdirectories from one item into chunk and other subdirectories into another chunk). As a result, it is best suited to transfers of many small-to-medium size items, rather than a transfer of one large item (e.g., a single hard drive with 10s of thousands of files). The chunk directories are created inside the transfer directory and are appended with a three-digit sequence. For example, a transfer 172345 with 12,234 files would be split into about 3 chunks: 172345-001, 172345-002, 172345-003

bhl_bd_utils.py ACCESSION_NUMBER --split_transfer [--split_size INT]

Argument Help
ACCESSION_NUMBER The accession number
--split_transfer Split transfer into smaller chunks
--split_size Maximum file count for each chunk (optional; defaults to 5,000)

Run Brunnhilde

This utility runs Brunnhilde to generate reports on the contents of a given transfer. The utility is configured to run Brunnhilde with the -z (decompress and scan archived files) and -n (skip virus scan) options. The outputs of this scan include a CSV output from Siegfried, a tree report of the transfer's directory structure, and an HTML report with aggregate statistics for the transfer including detailed information about file formats, unidentified files, last modified dates, and duplicate files. Reports will be output to the configured brunnhilde directory and will be copied to the transfer's metadata\submissionDocumentation directory once Brunnhilde has finished.

This utility can only be run from a Linux or macOS machine.

bhl_bd_utils.py ACCESSION_NUMBER --brunnhilde

Argument Help
ACCESSION_NUMBER The accession number
--brunnhilde Run Brunnhilde