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bernatgel
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karyoploteR
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
https://bernatgel.github.io/karyoploter_tutorial/
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kpAddBaseNumbers incorrect first tick label if tick.dist is set to <= 1Mbp
#154
JKing2000
opened
1 month ago
0
kpPlotRainfall error when given a path to VCF file that contains other variants than SNVs
#153
fawaz-dabbaghieh
opened
3 months ago
0
makeGenesDataFromTxDb did not pick up gene in some region
#152
h20gg702
opened
4 months ago
2
documentation of kpAxis
#151
Mitmischer
opened
5 months ago
0
Calculate gene densities seperately from plotting
#150
Mitmischer
opened
5 months ago
0
Merge kpPoints and kpPlotBigWig, the r0 r1 of kpPoints cannot be set correctly
#149
HMU-ChaoWang
opened
6 months ago
0
kpHeatmap Fails when only one y value that is not 1
#148
drneavin
opened
7 months ago
0
kpAddCytobandLabels with custom genome and cytoband file fails
#147
pkerbs
opened
7 months ago
3
Individual Colors for Histone Tracks
#146
g-zavagno
closed
8 months ago
5
Overlapping labels and huge gap between them
#145
scienception
opened
1 year ago
1
CNV heatmap clustering and metadata
#144
auroramaurizio
opened
1 year ago
2
installation fail
#143
DittmanC
closed
8 months ago
1
Borders of chromosomes in plot type 6 are not all the same
#142
jsokol94
closed
8 months ago
1
Error in graphics::par
#141
renee9904
closed
8 months ago
3
highlighting telomeres (adding custom symbols to chromosome ends)
#140
JWDebler
opened
1 year ago
3
plotting bedgraph data for all chromosome at once
#139
nirvana693
opened
1 year ago
6
kpPlotGenes: Overlapping gene names margin increase
#138
Hanuphant
opened
1 year ago
3
How would I use kpLines with kpPlotGenes?
#137
Hanuphant
closed
1 year ago
1
Change y-axis values
#136
pailloufat-stack
opened
1 year ago
0
How to use karyoploteR for non-model species?
#135
Song-10-YF
closed
1 year ago
1
Blue bands on ideogram
#134
mkyriak
closed
1 year ago
1
plots bams that have no "chr"
#133
anuravi1234
closed
1 year ago
2
some blocks are lacking in kpRect function
#132
zhoudreames
closed
1 year ago
2
kpBars will not change colors!
#131
shalvichirmade
closed
1 year ago
2
How to get plot name?
#130
DC-Jade
closed
1 year ago
2
How to get labels to not overlap other chromosomes?
#129
yonniejon
opened
1 year ago
2
Conda/Mamba installation: nothing provides r 3.2.2* needed by r-digest-0.6.9-r3.2.2_0
#128
JEstabrook
closed
1 year ago
1
kpPlotManhattan not plotting manhattan plot
#127
Maetchild
closed
2 years ago
2
auto adjust the Y-axis height
#126
nirvana693
closed
8 months ago
1
kpHeatmap control colors
#125
diyasen2021
opened
2 years ago
0
Vary arch.height in kpPlotLinks
#124
raunakms
opened
2 years ago
1
kpPlotBigWig: added ability to start with a pre-loaded bigwig
#123
tovahmarkowitz
closed
2 years ago
2
Add legend to kpHeatmap plot
#122
diyasen2021
closed
2 years ago
2
limit the coverage bar height
#121
Rohit-Satyam
opened
2 years ago
4
Overlapping of Gene symbol in kpPlotGenes
#120
JHKIM78
opened
2 years ago
0
Bam coverage differences between chromosomes
#119
diyasen2021
opened
2 years ago
2
karyoploteR installation issue, macos 12
#118
AMJseattle
closed
2 years ago
1
Ploting gene density on my custom chromosomes
#117
cell-c
opened
2 years ago
1
Chromosome positioning issues (2)
#116
dansapozhnikov
opened
2 years ago
3
Display of cytobands labels with plot.type =3
#115
Vincgass
opened
2 years ago
0
Incorrect Coordinates Chr. Labels
#114
merondun
closed
2 years ago
4
plot.params margin - inconsistent settings
#113
jromanowska
closed
2 years ago
1
kpAddLabels does not draw labels on the right side
#112
jromanowska
closed
2 years ago
2
How to add x axis title
#111
xiucz
closed
2 years ago
2
Rotated or staggered chromosome label, las argument?
#110
zx8754
closed
2 years ago
2
re: box plots
#109
mike-molnar
closed
3 years ago
1
about draw the plot
#108
zhoudreames
closed
2 years ago
1
Customize labels on specific chromosome
#107
Zhuxitong
closed
3 years ago
2
BSgenomeForge new rat genome
#106
motutaj
opened
3 years ago
1
Rainfall plot - value of y axis
#105
sainadfensi
opened
3 years ago
0
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