bertozzivill map-itn-cube issues

bertozzivill / map-itn-cube

Geospatial insecticide-treated net models for the Malaria Atlas Project

GNU General Public License v3.0

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make sure we're using all available MIS surveys

#72 bertozzivill closed 5 years ago
0
deal with citn survey trends in the absence of data

#71 bertozzivill closed 5 years ago
1
Follow up on new Ethiopia data

#70 bertozzivill closed 5 years ago
0
rerun cube using new stock and flow estimates

#69 bertozzivill closed 5 years ago
0
download and explore camp data

#68 bertozzivill closed 2 years ago
2
restructure git/gh page to follow how -> why format

#67 bertozzivill closed 5 years ago
0
move to a two-step system whereby no-survey countries are run after survey countries and utilize their loss parameters

#66 bertozzivill closed 5 years ago
2
Examine stock and flow loss function

#65 bertozzivill closed 5 years ago
4
remove duplicate survey in COG that keeps breaking the model

#64 bertozzivill closed 5 years ago
0
Test what happens if you run a GP on NMCP distribution before running the rest of stock and flow

#63 bertozzivill closed 5 years ago
1
debug non-covariance matrix model failures

#62 bertozzivill closed 5 years ago
2
review net + refugee camp/conflict literature

#61 bertozzivill closed 5 years ago
1
Move model prep code to its own script

#60 bertozzivill closed 5 years ago
0
get s&f running for all countries on gcloud

#59 bertozzivill closed 5 years ago
0
audit/check all s&f code before full run

#58 bertozzivill closed 5 years ago
0
Find source of S&F population dataset, or derive a stable version from frankenpop

#57 bertozzivill closed 5 years ago
0
Test inverting vs not-inverting sigma on nmcp fit

#56 bertozzivill closed 5 years ago
1
Explore covariate selection for itn cube

#55 bertozzivill closed 4 years ago
2
Move stock and flow to google cloud

#54 bertozzivill closed 5 years ago
1
appropriately characterize population-at-risk in stock and flow

#53 bertozzivill closed 5 years ago
3
standardize stock and flow population

#52 bertozzivill closed 5 years ago
2
make consistent data bounding decisions

#51 bertozzivill closed 5 years ago
0
update s&f to be evaluated via runjags for easier output assessment

#50 bertozzivill closed 5 years ago
1
try to replicate Pete's plots and add PAR

#49 bertozzivill closed 5 years ago
0
Write a function to extract a list of named variables from a jags model

#48 bertozzivill closed 5 years ago
0
remove unneeded elements from data passed to jags model

#47 bertozzivill closed 5 years ago
0
refactor jags text of model

#46 bertozzivill closed 5 years ago
0
review/refactor jags prior generating script

#45 bertozzivill closed 5 years ago
0
review/refactor hhsize script

#44 bertozzivill closed 5 years ago
0
get stock and flow running as-is

#43 bertozzivill closed 5 years ago
2
tropmed late breaker

#42 bertozzivill closed 5 years ago
0
modify code for new stock and flow estimates and survey data

#41 bertozzivill closed 5 years ago
0
Issue 12: new gcloud project + new covariates

#40 bertozzivill closed 5 years ago
0
clean new MICS data

#39 bertozzivill closed 5 years ago
1
remake ii maps

#38 bertozzivill closed 5 years ago
0
ask Suzanne about MICS data

#37 bertozzivill closed 5 years ago
2
Determine which surveys are replicates/need to be extracted

#36 bertozzivill closed 5 years ago
0
data audit for all input files

#35 bertozzivill closed 5 years ago
2
predict uncertainty for cube models

#34 bertozzivill closed 4 years ago
1
Obtain and organize stock and flow input files

#33 bertozzivill closed 5 years ago
0
explore modeling in nets percapita/nets used per capita space instead of (in addition to?) access/use space

#32 bertozzivill closed 4 years ago
0
compare current/older cubes to (possibly?) most archival cubes

#31 bertozzivill closed 5 years ago
1
move plotting code to its own folder; add preliminary and diagnostic plots

#30 bertozzivill closed 5 years ago
1
List new ITN questions/concerns to discuss

#29 bertozzivill closed 5 years ago
9
stock and flow: clean and interpret main model script

#28 bertozzivill closed 5 years ago
1
stock and flow: refactor data prep script

#27 bertozzivill closed 5 years ago
0
write preliminary cube results plotting code

#26 bertozzivill closed 5 years ago
0
reconsider criteria for "squashing" a country-year to zero

#25 bertozzivill closed 4 years ago
1
review and annotate stock and flow code

#24 bertozzivill closed 5 years ago
0
pick color schemes for maps

#23 bertozzivill closed 5 years ago
2

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