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bhattacharya-a-bt / CBCS_normalization

Code and summary results for "Best practices for normalization of Nanostring nCounter gene expression cohorts"
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k in RUV.total function #1

Closed ghost closed 3 years ago

ghost commented 3 years ago

I was trying to use your method to normalize my data and I did not get how k value and what does it mean, i could not find it in the tutorial either in the paper. This parameter is given in the RUV.total function.

ghost commented 3 years ago

I found it in RUVg documentation sorry

https://www.rdocumentation.org/packages/RUVSeq/versions/1.6.2/topics/RUVg-methods