CBCS_normalization

Code and summary results for "Best practices for normalization of Nanostring nCounter gene expression cohorts"

Included:

• nanostring_RUV_functions.R - R code for the functions used in normalization, quality control, and post-normalization visualization
• sabry_analysis.R - R code for analysis of Sabry et al, 2019 dataset. The raw data can be found here
• Click here for an easy to follow tutorial on nCounter normalization with RUVSeq
• These functions have been bundled into an R package. Click here to access the Github repository for NanoNormIter.