issues
search
bhklab
/
CoreGx
Shared code for both PharmacoGx and RadioGx
https://bhklab.github.io/CoreGx/
GNU General Public License v3.0
2
stars
3
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
The `assays(TreatmentResponseExperiment)` method is really slow in WSL2
#134
ChristopherEeles
opened
2 years ago
0
development
#133
ChristopherEeles
closed
2 years ago
0
Finish this presentation
#132
ChristopherEeles
closed
2 years ago
0
Finish `CoreSet2` constructor method
#131
ChristopherEeles
opened
2 years ago
0
Phase II: gDR integration
#130
ChristopherEeles
opened
2 years ago
0
Phase I: gDR integration
#129
ChristopherEeles
opened
2 years ago
0
Write tests to ensure `LongTable` -> `data.table` -> `LongTable` is symmetric (i.e., doesn't lose data)
#128
ChristopherEeles
opened
2 years ago
1
Fix #126 assay rows dropped in coercion from LongTable -> data.table
#127
ChristopherEeles
closed
2 years ago
0
as(LongTable, 'data.table') method is dropping rows
#126
ChristopherEeles
closed
2 years ago
0
Update the CoreGx summary* Methods
#124
ChristopherEeles
opened
2 years ago
0
Rename Slots cell to sample and drug or radiation to treatment
#123
ChristopherEeles
closed
1 year ago
1
Push LongTable aggregate methods to Bioconductor
#122
ChristopherEeles
closed
2 years ago
1
Development
#121
ChristopherEeles
closed
2 years ago
0
Problem with callingWaterfall
#120
hanbyuls
closed
2 years ago
4
LongTable regex subsets fail silently if one of the queries is missing
#119
ChristopherEeles
closed
2 months ago
0
mcc p-value is not correct for negative estimate
#118
spocks
closed
3 years ago
5
`CoreGx::connectivityScore` throws a warning from `piano::runGSA`
#117
ChristopherEeles
closed
2 months ago
0
updateMaxConc
#116
chuntul
closed
3 years ago
0
updateDrugId
#115
chuntul
closed
3 years ago
0
updateCellId
#114
chuntul
closed
3 years ago
0
unionList
#113
chuntul
closed
3 years ago
0
summarizeSensitivityProfiles
#112
chuntul
closed
3 years ago
0
summarizeMolecularProfiles
#111
chuntul
closed
3 years ago
0
subsetTo
#110
chuntul
closed
3 years ago
0
stripWhiteSpace
#109
chuntul
closed
3 years ago
0
showSigAnnot
#108
chuntul
closed
3 years ago
0
sensNumber<-
#107
chuntul
closed
6 years ago
0
sensNumber
#106
chuntul
closed
3 years ago
0
sensitivityProfiles<-
#105
chuntul
closed
6 years ago
0
sensitivityProfiles
#104
chuntul
closed
3 years ago
0
sensitivityMeasures
#103
chuntul
closed
3 years ago
0
sensitivityInfo<-
#102
chuntul
closed
6 years ago
0
sensitivityInfo
#101
chuntul
closed
3 years ago
0
sanitizeInput
#100
chuntul
closed
3 years ago
0
rescale
#99
chuntul
closed
3 years ago
0
rankGeneDrugSensitivity
#98
chuntul
closed
3 years ago
0
rankGeneDrugPerturbation
#97
chuntul
closed
3 years ago
0
pSetName
#96
chuntul
closed
3 years ago
0
phenoInfo<-
#95
chuntul
closed
6 years ago
0
phenoInfo
#94
chuntul
closed
3 years ago
0
PharmacoSig
#93
chuntul
closed
3 years ago
0
PharmacoSet
#92
chuntul
closed
3 years ago
0
pertNumber<-
#91
chuntul
closed
6 years ago
0
pertNumber
#90
chuntul
closed
3 years ago
0
molecularProfiles<-
#89
chuntul
closed
6 years ago
0
molecularProfiles
#88
chuntul
closed
3 years ago
0
mDataNames
#87
chuntul
closed
3 years ago
0
mcc
#86
chuntul
closed
3 years ago
0
logLogisticRegression
#85
chuntul
closed
3 years ago
0
intersectPSet
#84
chuntul
closed
3 years ago
0
Previous
Next