jbrowse_15.3 issue

[EtienneBucher]

Hi, I have tried to install the MethylationPlugin under jbrowse 1.15.3. Unfortunately the tracks don't properly display only showing grey bars saying "loading" (see attached screenshot). Only the HTML Methylation tracks display properly. I get the same result under MacOSX and Ubuntu.

[EtienneBucher]

I checked the javascript console and there is the following error: TypeError: Cannot read property 'toLowerCase' of undefined TypeError: Cannot read property 'toLowerCase' of undefined at fastDeclareClass.get

[bhofmei]

Thanks for that info. There’s been so many jbrowse updates recently it’s been hard to stay on top of testing. I’ll look into that error ASAP.

Brigitte

On Sep 16, 2018, at 8:43 AM, EtienneBucher notifications@github.com wrote:

I checked the javascript console and there is the following error: TypeError: Cannot read property 'toLowerCase' of undefined TypeError: Cannot read property 'toLowerCase' of undefined at fastDeclareClass.get

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[bhofmei]

I think I fixed it. Let me know if you still have problems.

[EtienneBucher]

Thank you for your fast response! Unfortunately I am still getting the same error: TypeError: Cannot read property 'toLowerCase' of undefined TypeError: Cannot read property 'toLowerCase' of undefined

[bhofmei]

Did you hit pull, rerun “./setup.sh”, and clear your cache?

Brigitte

On Sep 18, 2018, at 3:21 PM, Etienne Bucher notifications@github.com wrote:

Thank you for your fast response! Unfortunately I am still get the same error: TypeError: Cannot read property 'toLowerCase' of undefined TypeError: Cannot read property 'toLowerCase' of undefined

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[EtienneBucher]

Yes, that did it. Thank you very much for making this plugin! We use it A LOT ;-) Best wishes, Etienne