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bigdatagenomics
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bdg-formats
Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.
Apache License 2.0
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Update avro dependency version to 1.12.0
#221
heuermh
opened
1 month ago
0
update avro dependency version to 1.12.0
#220
heuermh
opened
1 month ago
1
Documentation comment vs multiline comment warnings
#219
heuermh
closed
8 months ago
1
Bump org.apache.avro:avro from 1.11.1 to 1.11.3
#218
dependabot[bot]
closed
8 months ago
0
Migrate CI from Travis to Github Actions
#217
heuermh
closed
1 year ago
0
Migrate CI from Travis to Github Actions
#216
heuermh
closed
1 year ago
0
Update Avro dependency version to 1.11.1
#215
heuermh
closed
1 year ago
0
Fix avro-maven-plugin version 1.11.1 warnings
#214
heuermh
closed
1 year ago
1
Update Avro dependency version to 1.11.1
#213
heuermh
closed
1 year ago
0
Update pom.xml url to Github repository
#212
heuermh
closed
2 years ago
0
Update pom.xml url to Github repository
#211
heuermh
closed
2 years ago
0
Update github-changes-maven-plugin version to 1.2
#210
heuermh
closed
2 years ago
0
[FORMATS-208] Add proteinId field to Feature
#209
heuermh
closed
3 years ago
0
Add proteinId field to Feature
#208
heuermh
closed
3 years ago
0
Update avro dependency version to 1.10.2
#207
heuermh
closed
3 years ago
0
[FORMATS-205] Add sample to Sequence, Slice, and Read
#206
heuermh
closed
3 years ago
0
Add sample to Sequence, Slice, and Read
#205
heuermh
closed
3 years ago
0
Update maven plugin dependency versions
#204
heuermh
closed
3 years ago
0
[FORMATS-202] Add impact, strand, ref/alt coding sequence, ref/alt protein sequence to TranscriptEffect
#203
heuermh
closed
3 years ago
0
Add impact, strand, ref/alt protein sequence, ref/alt coding sequence to TranscriptEffect
#202
heuermh
closed
3 years ago
0
Fix typo in contributing doc
#201
heuermh
closed
4 years ago
0
Minor updates to readme
#200
heuermh
closed
4 years ago
0
[FORMATS-197] Update release script to update changelog
#199
heuermh
closed
4 years ago
0
[FORMATS-196] Update changelog for versions 0.14.0 and 0.15.0
#198
heuermh
closed
4 years ago
0
Update release script to update changelog
#197
heuermh
closed
4 years ago
0
Changelog is missing versions 0.14.0 and 0.15.0
#196
heuermh
closed
4 years ago
0
[FORMATS-194] Enable Travis for CI build
#195
heuermh
closed
4 years ago
0
Migrate CI build to Travis or Github Actions
#194
heuermh
closed
4 years ago
0
[FORMATS-192] Use direct Jenkins build status link.
#193
heuermh
closed
4 years ago
2
Jenkins build status icon link is broken
#192
heuermh
closed
4 years ago
1
Add record definition for VCF header
#191
heuermh
closed
4 years ago
1
Use private field visibility in generated source.
#190
heuermh
closed
4 years ago
2
Add encoded sequence and sequence encoding.
#189
heuermh
closed
3 years ago
3
[FORMATS-164] Rename AlignmentRecord to Alignment.
#188
heuermh
closed
4 years ago
1
[FORMATS-182] Add barcodes field to ReadGroup
#187
heuermh
closed
5 years ago
2
[FORMATS-181] Use qualityScores for base quality scores
#186
heuermh
closed
5 years ago
1
[FORMATS-184] Snapshot version should be 0.14.0-SNAPSHOT
#185
heuermh
closed
5 years ago
1
Snapshot version should be 0.14.0-SNAPSHOT
#184
heuermh
closed
5 years ago
0
Add record definition for VariantContext
#183
heuermh
closed
4 years ago
1
Add barcodes field to ReadGroup
#182
heuermh
closed
5 years ago
3
Alignment record quality vs Read qualityScores
#181
heuermh
closed
5 years ago
0
[FORMATS-179] Use additionalJOptions element instead of additionalparam.
#180
heuermh
closed
5 years ago
0
Javadoc errors in generated code cause release to fail
#179
heuermh
closed
5 years ago
0
Release version 0.12.0
#178
heuermh
closed
5 years ago
1
Updating CHANGES.md
#177
heuermh
closed
5 years ago
1
[FORMATS-106] Refactor Genotype and GenotypeAnnotation.
#176
heuermh
closed
3 years ago
7
Refactor AlignmentRecord, RecordGroup, and ProcessingStep
#175
heuermh
closed
5 years ago
1
[FORMATS-173] Remove quality score variant
#174
heuermh
closed
5 years ago
1
Remove quality score variant
#173
heuermh
closed
5 years ago
0
Re-add reference.assembly field.
#172
heuermh
closed
5 years ago
1
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