Open mikkonie opened 3 months ago
There has been discussion with @Nicolai-vKuegelgen on possibly updating the default BAM/VCF omit patterns. The ones used as default should IMHO be the most generally applicable possible. I'm not the expert here, so feedback is definitely welcome.
*dragen_evidence.bam
*cnv.vcf.gz, *ploidy.vcf.gz, *sv.vcf.gz
*GRCh38*
*delly2*.vcf.gz, *manta*.vcf.gz, *melt*.vcf.gz, *gcnv*.vcf.gz, *GRCh38*
Comments or other suggestions?
There has been discussion with @Nicolai-vKuegelgen on possibly updating the default BAM/VCF omit patterns. The ones used as default should IMHO be the most generally applicable possible. I'm not the expert here, so feedback is definitely welcome.
Current Defaults
*dragen_evidence.bam*cnv.vcf.gz, *ploidy.vcf.gz, *sv.vcf.gzSuggested Replacements
*GRCh38**delly2*.vcf.gz, *manta*.vcf.gz, *melt*.vcf.gz, *gcnv*.vcf.gz, *GRCh38*Comments or other suggestions?