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bilayer-containers
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bilayers
https://bilayers.org
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Update README.md
#84
bethac07
opened
10 hours ago
0
Broken/non-existent links at https://bilayers.org/
#83
braymp
opened
1 day ago
0
Suggested procedure for group-wise operations?
#82
braymp
opened
1 day ago
1
first pass for ip/op
#81
rajavishah
opened
1 day ago
0
Testing
#79
rajavishah
opened
1 week ago
0
Docs
#78
rajavishah
opened
2 weeks ago
0
cli_tag if None, doesn't ignore that in cli_command construction : Jupyter Interface
#77
rajavishah
opened
3 weeks ago
0
Suggested spec parameter
#76
bethac07
opened
3 weeks ago
0
Docker Build - Action failed
#75
rajavishah
opened
3 weeks ago
0
[mod] docker-build github action
#74
rajavishah
closed
3 weeks ago
0
[mod] name in validate script and base docker image name in config
#73
rajavishah
closed
3 weeks ago
0
Action failing
#72
gnodar01
closed
3 weeks ago
0
Threshold rename
#71
rajavishah
closed
3 weeks ago
1
[bumped] basedockerfile version in cellpose
#70
rajavishah
closed
3 weeks ago
0
IndexError when processing single-page TIFF file in cellpose CLI due to multi-page assumption
#69
rajavishah
closed
3 weeks ago
0
Docs trial
#68
rajavishah
closed
4 weeks ago
1
Future consideration - including logic for picking interface versions in the interface Dockerfiles
#66
bethac07
opened
1 month ago
0
Consider if pixi source container support adds too much hassle
#65
bethac07
closed
1 month ago
13
Low priority to think about - rename "threshold"
#62
bethac07
closed
3 weeks ago
0
Inital commit for MyST
#61
rajavishah
closed
1 month ago
0
Enforce lowercase renames with Temporary Rename for Case Sensitivity
#60
rajavishah
closed
1 month ago
1
Change Folder Names to Lowercase for Consistency and Cross-Platform Compatibility
#59
gnodar01
closed
1 month ago
3
threshold X jupyter - output folder same as input_images folder has some problem
#58
rajavishah
closed
3 weeks ago
1
Threshold works with cli_tags (custom threshold.py)
#57
rajavishah
closed
3 weeks ago
1
Add inputs and outputs to spec [DRAFT]
#56
bethac07
opened
1 month ago
1
Fixing some recently noticed problems
#54
rajavishah
closed
1 month ago
8
JupyterNB Error directly reports to bug_report template
#53
rajavishah
closed
2 months ago
3
Yaml validator
#52
rajavishah
closed
2 months ago
0
Issue templates
#51
rajavishah
closed
2 months ago
9
Add instanseg
#49
bethac07
opened
2 months ago
5
Documentation Jupyter Book
#48
rajavishah
closed
1 month ago
0
Bug Fixation
#47
rajavishah
closed
2 months ago
0
Testing Strategy
#46
rajavishah
opened
2 months ago
0
Fixation needed for optional
#44
rajavishah
opened
2 months ago
0
Handling cli_flag and value appending
#37
rajavishah
closed
1 month ago
11
Changes needed in config.yaml
#36
rajavishah
closed
1 month ago
11
Implement YAML validator for validating config.yaml
#35
rajavishah
closed
2 months ago
0
Jupyter Notebook is unable to display output files on the interface
#34
rajavishah
closed
2 months ago
3
Enhance Bug Reporting(Error display) Feature
#33
rajavishah
closed
2 months ago
1
Citation Guidelines for Bilayers
#32
rajavishah
closed
1 month ago
0
Alternative File Upload Method via Volume Mount
#31
rajavishah
closed
2 months ago
2
Rename `cellpose` to `cellpose_inference`
#30
bethac07
closed
2 months ago
0
Todos before sharing with the outside world
#29
bethac07
opened
3 months ago
9
JupyterNB Interface - Single Cell for Variable Input
#27
rajavishah
closed
2 months ago
1
V0.1 template and folder
#26
rajavishah
closed
2 months ago
5
Cellpose(Inputs)xJupyterNotebook
#23
rajavishah
closed
4 months ago
2
Generating JupyterNB dynamically
#22
rajavishah
closed
4 months ago
0
V0.1 enhance cellpose
#19
rajavishah
closed
4 months ago
1
V0.1 cellpose
#18
rajavishah
closed
4 months ago
6
v0.1_template
#17
rajavishah
closed
4 months ago
0
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