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biobricks-ai / biobricks

BioBricks makes loading data from biological datasets and databases easy. Python and R interfaces, data version control, and an API for pulling datasets that have been converted to easy-to-use formats.
https://docs.biobricks.ai
MIT License
5 stars 2 forks source link

When multiple users are using the same biobricks library there are ownership issues #13

Closed tomlue closed 7 months ago

tomlue commented 8 months ago 
yifan@wsl:~/molecular-vae$ python processTox21.py
fatal: detected dubious ownership in repository at '/mnt/ssd/biobricks/biobricks-ai/tox21/5c16c5012ef64298a947a857c190d50aabe45383'
To add an exception for this directory, call:
    git config --global --add safe.directory /mnt/ssd/biobricks/biobricks-ai/tox21/5c16c5012ef64298a947a857c190d50aabe45383
Traceback (most recent call last):
  File "/home/yifan/molecular-vae/processTox21.py", line 5, in <module>
    ns = bb.assets('tox21') # get the paths for the 'tox21' brick
  ^^^^^^^^^^^^^^^^^^^^^^^
  File "/home/yifan/.local/lib/python3.11/site-packages/biobricks/api.py", line 9, in assets

image

tomlue commented 7 months ago

fixed in 0.2.2