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bioconda / bioconda-recipes

Conda recipes for the bioconda channel.
https://bioconda.github.io
MIT License
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Your details for the Bioconda paper author list #6323

Closed johanneskoester closed 6 years ago

johanneskoester commented 6 years ago

Dear @bioconda/all, to create the author list of the Bioconda paper, we need your full name and affiliation (include address). I hope to be able to include everybody who is part of the github team, posts his/her details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper. Email addresses are not needed.

PI's who want to be included on the authors list without having personally committed code: please write me (johannes.koester@protonmail.com) an email, outlining your contribution. I will forward it to @bgruening and @daler, we will discuss this and come back to you as soon as possible.

keuv-grvl commented 6 years ago

Kévin Gravouil Université Clermont Auvergne, INRA, MEDIS, F-63000 Clermont-Ferrand, France http://orcid.org/0000-0002-0838-8025

jbaaijens commented 6 years ago

Jasmijn A. Baaijens Centrum Wiskunde and Informatica, 1098 XG Amsterdam, Netherlands

glormph commented 6 years ago

Jorrit Boekel Department of Oncology-Pathology, NBIS (National Bioinformatics Infrastructure Sweden), Science for Life Laboratory, Karolinska Institutet, Box 1031 17121 Solna, Sweden

ewels commented 6 years ago

Philip Ewels

xguse commented 6 years ago

W. Augustine Dunn Boston Children's Hospital GI/Nutrition http://orcid.org/0000-0002-8683-1459

jrderuiter commented 6 years ago

Julian R. de Ruiter Divisions of Molecular Pathology and Molecular Carcinogenesis The Netherlands Cancer Institute, Amsterdam, the Netherlands

tobiasrausch commented 6 years ago

Tobias Rausch European Molecular Biology Laboratory (EMBL), Genomics Core Facility, Heidelberg, Germany

orcid.org/0000-0001-5773-5620

molpopgen commented 6 years ago

Kevin Thornton Department of Ecology and Evolutionary Biology University of California Irvine Irvine, CA 92697

On Mon, Oct 16, 2017 at 2:43 AM Johannes Köster notifications@github.com wrote:

Dear @bioconda/all https://github.com/orgs/bioconda/teams/all, to create the author list of the Bioconda paper, we need your full name and affiliation. I hope to be able to include everybody who is part of the github team, posts his details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323, or mute the thread https://github.com/notifications/unsubscribe-auth/AGHnH9AHD7RsMASQMGpSHbXbKPVUmtIAks5ssyUUgaJpZM4P6WWu .

--

Kevin Thornton

Associate Professor

Ecology and Evolutionary Biology

UC Irvine

http://www.molpopgen.org

http://github.com/ThorntonLab

http://github.com/molpopgen

cokelaer commented 6 years ago

Thomas Cokelaer Institut Pasteur - Bioinformatics and Biostatistics Hub - C3BI, USR 3756 IP CNRS – Paris, France ORCID : orcid.org/0000-0001-6286-1138

cristhomas commented 6 years ago

Cristel Thomas Northrop Grumman Corporation, Technology Services, Rockville MD USA

mgopez commented 6 years ago

Matthew Gopez National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

sachalau commented 6 years ago

Sacha Laurent Institute of Microbiology, Universitary Hospital of Lausanne, Switzerland

rob-p commented 6 years ago

Rob Patro Department of Computer Science, Stony Brook University Stony Brook, NY 11794-2424

camytran commented 6 years ago

Camy Tran National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

simonvh commented 6 years ago

Simon van Heeringen, Radboud University, Faculty of Science, Department of Molecular Developmental Biology, Radboud Institute for Molecular Life Sciences, 6500 HB Nijmegen, the Netherlands

zachcp commented 6 years ago

Zachary Charlop-Powers The Laboratory for Genetically Encoded Small Molecules, The Rockefeller University. New York, NY USA ORCID: orcid.org/0000-0001-8816-4680

arvkevi commented 6 years ago

Kevin Arvai GeneDx Gaithersburg, MD 20877

notestaff commented 6 years ago

Ilya Shlyakhter Broad Institute of MIT and Harvard Cambridge, MA 02142 ORCID: orcid.org/0000-0002-9854-5118

mvdbeek commented 6 years ago

Marius van den Beek Stem Cells and Tissue Homeostasis, Institut Curie Paris, France orcid.org/0000-0002-9676-7032

Takadonet commented 6 years ago

Philip Mabon National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

JenCabral commented 6 years ago

Jennifer Cabral National Microbiology Laboratory, Public Health Agency of Canada Winnipeg, MB, Canada

kepbod commented 6 years ago

Xiao-Ou Zhang Program in Bioinformatics and Integrative Biology University of Massachusetts Medical School Worcester, MA 01605, USA

ericenns commented 6 years ago

Eric Enns National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

brwnj commented 6 years ago

Joseph Brown Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352

davidechicco commented 6 years ago

Davide Chicco, Princess Margaret Cancer Centre, PMCR Tower 11-401, 101 College Street, Toronto M5G 1L7, Ontario, Canada

davide.chicco@davidechicco.it

ORCID code: 0000-0001-9655-7142

ernfrid commented 6 years ago

David E Larson The McDonnell Genome Institute Washington University St. Louis, MO 63108, USA http://orcid.org/0000-0001-7934-5906

yesimon commented 6 years ago

Simon Ye Massachusetts Institute of Technology 77 Massachusetts Ave, Cambridge, MA 02139

On Mon, Oct 16, 2017 at 9:43 AM, Davide Chicco notifications@github.com wrote:

Davide Chicco, Princess Margaret Cancer Centre, PMCR Tower 11-401, 101 College Street, Toronto M5G 1L7, Ontario, Canada https://maps.google.com/?q=401,+101+College+Street,+Toronto+M5G+1L7,+Ontario,+Canada&entry=gmail&source=g

davide.chicco@davidechicco.it

ORCID code: 0000-0001-9655-7142 http://orcid.org/0000-0001-9655-7142

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323#issuecomment-336890721, or mute the thread https://github.com/notifications/unsubscribe-auth/AAku75bA7eMhYN4LmXwdh4VrVRGf0vIAks5ss12bgaJpZM4P6WWu .

karel-brinda commented 6 years ago

Karel Brinda Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, MA 02115, USA ORCID: http://orcid.org/0000-0003-0200-557X

oena commented 6 years ago

Oana M. Enache Broad Institute of MIT and Harvard 415 Main Street, Cambridge, MA 02142 ORCID: http://orcid.org/0000-0002-9541-0058

davebx commented 6 years ago

Dave Bouvier The Pennsylvania State University, Department of Biochemistry & Molecular Biology Old Main, University Park, PA 16802

JudoWill commented 6 years ago

Will Dampier Drexel University College of Medicine Department of Microbiology and Immunology Philadelphia, PA

rfarouni commented 6 years ago

Rick Farouni Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02129 ORCID: http://orcid.org/0000-0002-3454-2946

prvst commented 6 years ago

Felipe da Veiga Leprevost Pathology Department, University of Michigan, Ann Arbor, MI, 48109 ORCID: https://orcid.org/0000-0002-8228-5374

lparsons commented 6 years ago

Lance Parsons Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08540 ORCID: https://orcid.org/0000-0002-8521-714X

hainm commented 6 years ago

Hai Nguyen Department of Chemistry & Chemical Biology Rutgers University Piscataway, NJ 08854, USA

hainm commented 6 years ago

I hope to be able to include everybody who is part of the github team, posts his details here,

@johanneskoester I believe you meant "his/her" in this context, right?

johanneskoester commented 6 years ago

@hainm yes of course, sorry. I fixed it.

snewhouse commented 6 years ago

Stephen J Newhouse1,2,3:

  1. Department of Biostatistics and Health Informatics, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, London, UK.
  2. NIHR Biomedical Research Centre at South London and Maudsley NHS Foundation Trust and King’s College London, UK
  3. Farr Institute of Health Informatics Research, UCL Institute of Health Informatics, University College London, London, United Kingdom.

On 16 October 2017 at 15:36, Johannes Köster notifications@github.com wrote:

@hainm https://github.com/hainm yes of course, sorry. I fixed it.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323#issuecomment-336906833, or mute the thread https://github.com/notifications/unsubscribe-auth/AGBkV_BMWDxy8iBEi0R5NAv5G7Yao7Iwks5ss2n1gaJpZM4P6WWu .

--

snewhouse commented 6 years ago

Sending details again with orcid id this time:

Stephen J Newhouse (1,2,3)

  1. Department of Biostatistics and Health Informatics, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, London, UK.
  2. NIHR Biomedical Research Centre at South London and Maudsley NHS Foundation Trust and King’s College London, UK
  3. Farr Institute of Health Informatics Research, UCL Institute of Health Informatics, University College London, London, United Kingdom

orcid.org/0000-0002-1843-9842

This is great!

On 16 October 2017 at 15:40, Stephen Newhouse stephen.j.newhouse@gmail.com wrote:

Stephen J Newhouse1,2,3:

  1. Department of Biostatistics and Health Informatics, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, London, UK.
  2. NIHR Biomedical Research Centre at South London and Maudsley NHS Foundation Trust and King’s College London, UK
  3. Farr Institute of Health Informatics Research, UCL Institute of Health Informatics, University College London, London, United Kingdom.

On 16 October 2017 at 15:36, Johannes Köster notifications@github.com wrote:

@hainm https://github.com/hainm yes of course, sorry. I fixed it.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323#issuecomment-336906833, or mute the thread https://github.com/notifications/unsubscribe-auth/AGBkV_BMWDxy8iBEi0R5NAv5G7Yao7Iwks5ss2n1gaJpZM4P6WWu .

--

--

roryk commented 6 years ago

Rory Kirchner Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts 02115

mworkentine commented 6 years ago

Matthew L. Workentine Faculty of Veterinary Medicine, University of Calgary Calgary, AB, Canada

yhoogstrate commented 6 years ago

Youri Hoogstrate Erasmus Medical Center, Department of Urology, Wytemaweg 80, 3015 CN, Rotterdam, The Netherlands

moskalenko commented 6 years ago

Oleksandr Moskalenko UFIT Research Computing, University of Florida, Gainesville, FL, 32611, USA orcid.org/0000-0003-1377-936X

BiancaStoecker commented 6 years ago

Bianca Katharina Stöcker Genome Informatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, 45147 Essen, Germany

colinbrislawn commented 6 years ago

Colin Brislawn Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory Richland, WA 99354, USA orcid.org/0000-0002-9109-1950

cumbof commented 6 years ago

Fabio Cumbo

  1. Department of Engineering, Roma Tre University, Via della Vasca Navale 79/81, 00146 Rome, Italy
  2. Institute for Systems Analysis and Computer Science "Antonio Ruberti", National Research Council of Italy, Via dei Taurini 19, 00185 Rome, Italy
  3. Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, United States of America

orcid.org/0000-0003-2920-5838

brentp commented 6 years ago

Brent S Pedersen Department of Human Genetics University of Utah Eccles Institute of Human Genetics Salt Lake City, UT 84132 http://orcid.org/0000-0003-1786-2216

daler commented 6 years ago

Ryan Dale

Laboratory of Cellular and Developmental Biology National Institute of Diabetes and Digestive and Kidney Diseases National Institutes of Health 9000 Rockville Pike, Bethesda, MD 20892, USA

http://orcid.org/0000-0003-2664-3744

HenningTimm commented 6 years ago

Henning Timm

Genome Informatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, 45147 Essen, Germany

http://orcid.org/0000-0002-5345-7122

acaprez commented 6 years ago

Adam Caprez Holland Computing Center University of Nebraska 118 Schorr Center, Lincoln, NE 68588