Your details for the Bioconda paper author list

[johanneskoester]

Dear @bioconda/all, to create the author list of the Bioconda paper, we need your full name and affiliation (include address). I hope to be able to include everybody who is part of the github team, posts his/her details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper. Email addresses are not needed.

PI's who want to be included on the authors list without having personally committed code: please write me (johannes.koester@protonmail.com) an email, outlining your contribution. I will forward it to @bgruening and @daler, we will discuss this and come back to you as soon as possible.

[shenwei356]

Wei Shen Department of Clinical Laboratory, Chengdu Military General Hospital Chengdu, Sichuan, China http://orcid.org/0000-0002-8099-8258

With only 30 commits 231 ++ 156 -- :)

[Adrianzo]

Adrian Emanuel Salatino

Department of Molecular Genetics and Biology of Complex Diseases, Institute of Medical Research A Lanari-IDIM, University of Buenos Aires, National Scientific and Technical Research Council (CONICET), Ciudad Autónoma de Buenos Aires, Argentina.

[kyleabeauchamp]

Kyle A. Beauchamp Counsyl South San Francisco, CA 94080

I may need a conflict of interest statement such as "KAB is an employee of Counsyl, Inc."

[mcornwell1957]

MacIntosh Cornwell New York University School of Medicine, New York City, NY, 10010

[aldro61]

Alexandre Drouin Department of Computer Science and Software Engineering, Université Laval 1065, av. de la Médecine, Québec (Québec) G1V 0A6, Canada https://orcid.org/0000-0001-7718-0319

[upendrak]

Upendra Kumar Devisetty CyVerse, Bio5 institute, University of Arizona Tucson, AZ, 85719 http://orcid.org/0000-0003-4686-7235

[RobertKleinkauf]

Robert Kleinkauf

no affiliation

Am 16.10.2017 um 11:42 schrieb Johannes Köster:

Dear @bioconda/all https://github.com/orgs/bioconda/teams/all, to create the author list of the Bioconda paper, we need your full name and affiliation. I hope to be able to include everybody who is part of the github team, posts his details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323, or mute the thread https://github.com/notifications/unsubscribe-auth/AGOO1e0HeKPj0v_6oj_iiBD_8HDMFYznks5ssyUUgaJpZM4P6WWu.

[tiagoantao]

Tiago Antao Division of Biological Sciences University of Montana, Missoula, United States of America

[blankenberg]

Daniel Blankenberg Genomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA orcid.org/0000-0002-6833-9049

[lpantano]

Lorena Pantano Harvard T.H. Chan School of Public Health, Boston, MA, USA

On Oct 16, 2017, at 5:42 AM, Johannes Köster notifications@github.com wrote:

Dear @bioconda/all https://github.com/orgs/bioconda/teams/all, to create the author list of the Bioconda paper, we need your full name and affiliation. I hope to be able to include everybody who is part of the github team, posts his details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323, or mute the thread https://github.com/notifications/unsubscribe-auth/ABi_HEweHHKJG-FrfdM2Qs5aSas7rlT2ks5ssyUNgaJpZM4P6WWu.

[nickp60]

Nicholas R. Waters Department of Microbiology, School of Natural Sciences, National University of Ireland, Galway, Ireland Information and Computational Sciences, James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland orcid.org/0000-0002-9035-2143

[NickSto]

Nicholas Stoler Department of Biochemistry and Molecular Biology, Penn State University, University Park, Pennsylvania, USA

[saketkc]

Saket Choudhary Computational Biology and Bioinformatics University of Southern California, Los Angeles, USA http://orcid.org/0000-0001-5202-7633

[raivivek]

Vivek Rai Department of Computational Medicine and Bioinformatics University of Michigan, Ann Arbor, Michigan 48109, USA

[hardingnj]

Nicholas Harding Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, OX3 7FZ, UK. https://www.scopus.com/authid/detail.uri?authorId=54998936300

[jxtx]

James Taylor Departments of Biology and Computer Science, Johns Hopkins University http://orcid.org/0000-0001-5079-840X

[gregvonkuster]

Greg Von Kuster Institute for CyberScience Penn State University

[chambm]

Matt Chambers Department of Biochemistry, Molecular Biology and Biophysics (as contractor, not employee) University of Minnesota, Minneapolis, MN, USA

[thw17]

Timothy H. Webster School of Life Sciences, Arizona State University 85287

http://orcid.org/0000-0003-1174-2395

[alexpreynolds]

Alex Reynolds Altius Institute for Biomedical Sciences Seattle, WA, USA http://orcid.org/0000-0003-1409-8945

[arose]

Alexander S Rose RCSB Protein Data Bank, San Diego Supercomputer Center, University of California, San Diego, La Jolla, CA 92093, USA http://orcid.org/0000-0002-0893-5551

[jmeppley]

John M Eppley Daniel K. Inouye Center for Microbial Oceanography: Research and Education, Department of Oceanography, University of Hawaii, Honolulu, Hawaii 96822, USA. http://orcid.org/0000-0001-5334-1704

[dirmeier]

Simon Dirmeier Department of Biosystems Science and Engineering, ETH Zurich Mattenstrasse 26 4058 Basel, Switzerland

[druvus]

Andreas Sjödin

1. Division of CBRN Security and Defence, FOI - Swedish Defence Research Agency, Umeå. Sweden
2. Department of Chemistry, Computational Life Science Cluster (CLiC), Umeå University, Umeå, Sweden

[rvalieris]

Renan Valieris Laboratory of Bioinformatics and Computational Biology, A. C. Camargo Cancer Center São Paulo, SP, Brazil

[Slugger70]

Simon Gladman Melbourne Bioinformatics - University of Melbourne, Australia.

On 16 October 2017 at 20:42, Johannes Köster notifications@github.com wrote:

Dear @bioconda/all https://github.com/orgs/bioconda/teams/all, to create the author list of the Bioconda paper, we need your full name and affiliation. I hope to be able to include everybody who is part of the github team, posts his details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323, or mute the thread https://github.com/notifications/unsubscribe-auth/ABqN3gnTFVNST1pj22yZ2vnQ1ErrYxT1ks5ssyUOgaJpZM4P6WWu .

--

Simon Gladman | Second Lieutenant

Wyndham Vale Fire Brigade

PO Box 410 Werribee 3030

Mob. 0418 421 077

Email. simon.gladman@unimelb.edu.au simon.gladman@unimelb.edu.au

[asntech]

Aziz Khan Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, 0318, Oslo, Norway http://orcid.org/0000-0002-6459-6224

[ThomasWollmann]

Thomas Wollmann University of Heidelberg and DKFZ, Im Neuenheimer Feld 267, 69120 Heidelberg, Germany http://orcid.org/0000-0002-4741-3844

[mikheyev]

Alexander S Mikheyev

1. Evolutionary Genomics Lab, Research School of Biology, The Australian National University, Canberra, ACT 2601 AUSTRALIA
2. Ecology and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, Onna-son, Kunigami-gun, Okinawa, 904-0495 JAPAN

[jj-umn]

James E. Johnson Minnesota Supercomputing Institute University of Minnesota, Minneapolis, MN, USA

[zqfang]

Zhuoqing Fang

Shanghai Institutes for Biological Sciences, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yueyang Road, Shanghai 200031, China

[jcapelladesto]

Jordi Capellades

1. Metabolomics Platform, Department of Electronic Engineering (DEEEA), Universitat Rovira i Virgili, Tarragona, Spain.

2. Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM), Madrid, Spain.

@johanneskoester : I edited my affiliations. Sorry for any inconvenience

[dyusuf]

Dilmurat Yusuf

Bioinformatics Group, Department of Computer Science, University of Freiburg, Georges-Köhler-Allee 106, 79110, Freiburg, Germany

[sebastian-luna-valero]

• Sebastian Luna-Valero
• MRC Weatherall Institute of Molecular Medicine, University of Oxford, OX3 9DS

[mlbendall]

Matthew L. Bendall

1. Computational Biology Institute, Milken Institute School of Public Health, The George Washington University, Washington, D.C., USA.
2. Department of Microbiology, Immunology & Tropical Medicine, The George Washington University School of Medicine and Health Sciences, Washington, D.C., USA.

http://orcid.org/0000-0001-9816-5425

[dmaticzka]

Daniel Maticzka Bioinformatics Group, Department of Computer Science, University of Freiburg, Germany http://orcid.org/0000-0001-6976-9385

[chambm]

I feel sorry for whoever has to compile all these (@johanneskoester ?), maybe asking for bibtex format would have been better. :smile: Can't wait to see this author page though...

[xgaia]

Xavier Garnier

INRA, UMR IGEPP, BioInformatics Platform for Agroecosystems Arthropods (BIPAA), Campus Beaulieu, Rennes, 35042 France

Dyliss - Dynamics, Logics and Inference for biological Systems and Sequences , Inria/IRISA, Campus Beaulieu, Rennes, 35042 France

On 10/16/2017 11:42 AM, Johannes Köster wrote:

Dear @bioconda/all https://github.com/orgs/bioconda/teams/all, to create the author list of the Bioconda paper, we need your full name and affiliation. I hope to be able to include everybody who is part of the github team, posts his details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323, or mute the thread https://github.com/notifications/unsubscribe-auth/ARe0khAtmvBBaFzYRGi0QAvzgDxwgNIGks5ssyUZgaJpZM4P6WWu.

[mbargull]

Marcel Bargull

Genome Informatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, 45147 Essen, Germany

[yp]

Yuri Pirola

Dip. di Informatica Sistemistica e Comunicazione, Univ. degli Studi di Milano-Bicocca, Milan, Italy

[davidliwei]

Wei Li Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Harvard T.H. Chan School of Public Health Boston, MA 02215

On Mon, Oct 16, 2017 at 5:42 AM, Johannes Köster notifications@github.com wrote:

Dear @bioconda/all https://github.com/orgs/bioconda/teams/all, to create the author list of the Bioconda paper, we need your full name and affiliation. I hope to be able to include everybody who is part of the github team, posts his details here, and has at least one commit into the publication, because I don't want to be the person who decides about a threshold (this is no promise, but we'll try). You all deserve it, as you are doing a great job for the community.

The manuscript is here: https://www.authorea.com/189458/KlIqJYJOA5EPyUZjY9UG6g We currently plan to submit to Nature Methods.

So, please post your details here if you want to be part of the paper.

— You are receiving this because you are on a team that was mentioned. Reply to this email directly, view it on GitHub https://github.com/bioconda/bioconda-recipes/issues/6323, or mute the thread https://github.com/notifications/unsubscribe-auth/AA8Y7j8nkJcMLU8avI3HT5OtEYz4JF1Gks5ssyULgaJpZM4P6WWu .

-- Wei Li Department of Biostatistics and Computational Biology Dana-Farber Cancer Institute, Harvard School of Public Health Boston, MA 02215

[jenzopr]

Jens Preussner ECCPS Bioinformatics Core Unit Max Planck Institute for Heart and Lung Research, 61231 Bad Nauheim, Germany

Great job, @johanneskoester ! Thank you so much!

[emilhaegglund]

Emil Hägglund Department of Molecular Evolution, Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, SE-752 36 Uppsala, Sweden

[vinjana]

Philip Reiner Kensche German Cancer Research Center (DKFZ), Foundation under Public Law Im Neuenheimer Feld 280, 69120 Heidelberg, Germany http://orcid.org/0000-0003-1299-9600

[joachimwolff]

Joachim Wolff Bioinformatics Group Department of Computer Science University of Freiburg Georges-Köhler-Allee 106 D-79110 Freiburg im Breisgau Germany

[guowei-he]

Guowei He High Performance Computing, NYU Abu Dhabi, 129188, Abu Dhabi, UAE

[christofsteel]

Christoph Stahl, Genome Informatics, University of Duisburg Essen

[ccwang002]

Liang-Bo Wang Oncology Division, Department of Medicine, Washington University School of Medicine, St. Louis, MO 63108, USA McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO 63108, USA http://orcid.org/0000-0001-6977-9348

[micknudsen]

Michael Knudsen Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark

[JungeAlexander]

Alexander Junge Disease Systems Biology Program, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark https://orcid.org/0000-0002-2410-9671