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biocore
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mmvec
Neural networks for microbe-metabolite interaction analysis
BSD 3-Clause "New" or "Revised" License
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visualization the result of mmvec
#181
Chauncy-Fang
opened
4 weeks ago
1
What's the threshod of p*n in the microbe and metabolite datasets?
#180
12Hanyue
closed
4 weeks ago
4
ValueError: 'a' cannot be empty unless no samples are taken
#179
Chauncy-Fang
closed
4 weeks ago
3
Plugin error from mmvec: local variable 'rU' referenced before assignment
#178
justinshaffer
closed
7 months ago
0
Tensorflow-gpu is not found upon installation
#177
KDSpencer77
opened
10 months ago
1
Version compatibility issues
#176
MOUTAI-Lee
closed
1 month ago
2
Compatibility issues on macbook pro with M1 chip
#175
mdoolin2014
opened
1 year ago
4
docs: specify abundance vs frequency
#174
LenaFloerl
closed
1 year ago
1
Different results
#173
xmcr
closed
1 month ago
4
error: no such option: --o-model-stats
#172
xmcr
closed
1 year ago
10
An qiime2 error has occurred
#171
xmcr
closed
1 year ago
5
Plugin error from mmvec: index 0 is out of bounds for axis 0 with size 0
#170
mortonjt
opened
2 years ago
0
tensorflow.contrib
#169
Ma-tengyu
closed
2 years ago
1
Pytorch refactor
#168
ebolyen
opened
2 years ago
2
DRAFT: first draft of model
#167
Keegan-Evans
closed
2 years ago
0
MMvec refactor
#166
mortonjt
opened
2 years ago
6
Tips and Tricks to speed up training
#165
mortonjt
opened
2 years ago
0
Why 13 metabolites as ground truth in soil dataset?
#164
wanglu2014
closed
2 years ago
2
Could mmvec measure the consumption of metabolites?
#163
wanglu2014
closed
2 years ago
1
what is the role of example?
#162
kechen1984
closed
2 years ago
4
help with heatmap conditionals to create ranks.qza file
#161
CarlaCristinaUranga
closed
2 years ago
1
Minor fixes
#160
gibsramen
closed
3 years ago
1
Plugin error from mmvec
#159
CarlaCristinaUranga
closed
3 years ago
14
ranks with full taxonomic hierarqui rather than featureid
#158
iratxezarra
closed
2 years ago
2
Error: QIIME 2 has no plugin/command named 'mmvec'.
#157
ssorgatem
closed
2 years ago
3
heatmap change "--p-x-labels " size
#156
iratxezarra
closed
2 years ago
3
paired_omics error - 'arm_the_gpu'
#155
lindsval
closed
3 years ago
5
ranks.qza file for heatmap
#154
MilouArts
closed
3 years ago
7
Error from biom table in wrong orientation and some manual suggestions
#153
MilouArts
closed
3 years ago
5
Docs
#152
mortonjt
closed
3 years ago
0
Convergence stats
#151
mortonjt
closed
3 years ago
1
Trouble running mmvec/Tensorflow
#150
CarlaCristinaUranga
closed
3 years ago
10
Nan in summary histogram for: qUbias_1 (was also qUmain or qVmain)
#149
tgroth97
closed
4 years ago
7
Tensorflow numpy incompatible with Qiime 2020.8 (current version)
#148
afvrbanac
closed
4 years ago
4
Normality test for relative abundance data
#147
khemlalnirmalkar
closed
4 years ago
4
heatmap in svg format
#146
khemlalnirmalkar
closed
3 years ago
3
Upgrade pandas
#145
mortonjt
opened
4 years ago
0
Tensorboard only shows a single point
#144
mortonjt
opened
4 years ago
0
heatmap missing some in row and column
#143
LiZhihua1982
closed
4 years ago
1
Error running with my data (a' cannot be empty)
#142
amartinsan
closed
4 years ago
4
heatmap-paired unable to find some features
#141
mestaki
closed
4 years ago
5
Update README.md
#140
mestaki
closed
4 years ago
1
Ensuring q2-plug-in ran correctly
#139
BrandonDKayser
closed
4 years ago
4
FIX: enabling batch size to be explicitly specified
#138
mortonjt
closed
4 years ago
1
doubt in generating a heatmap
#137
khemlalnirmalkar
closed
4 years ago
4
mmvec metagenomic full abundance table or sub-selected table
#136
luzhang321
opened
4 years ago
1
mmvec with shotgun metagenome+metabolome
#135
khemlalnirmalkar
closed
4 years ago
43
Exact parameters used in paper
#134
LeonurusCardiaca
closed
4 years ago
2
Error in the paired-heatmap
#133
helenamrusso
closed
4 years ago
4
Suggestion for FAQ
#132
redbluewater
closed
4 years ago
7
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