issues
search
biocore
/
q2-qemistree
Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
BSD 2-Clause "Simplified" License
31
stars
16
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Meta update
#58
anupriyatripathi
closed
5 years ago
0
Meta update
#57
anupriyatripathi
closed
5 years ago
2
save canopus fingerprints in the csifingerID step
#56
anupriyatripathi
opened
5 years ago
0
use biom for _match.py
#55
anupriyatripathi
opened
5 years ago
0
save zodiac summary file
#54
anupriyatripathi
closed
5 years ago
1
module for meta analyses
#53
anupriyatripathi
closed
5 years ago
1
module to create tree when structure is known
#52
anupriyatripathi
opened
5 years ago
0
Addition of a module to create a molecular network output adjacency list
#51
mwang87
closed
5 years ago
0
module to check mgf file format
#50
anupriyatripathi
closed
3 years ago
0
fingerprints & tree for GC data
#49
anupriyatripathi
closed
4 years ago
1
updating user documentation
#48
anupriyatripathi
closed
5 years ago
1
probabilistic fingerprints
#47
anupriyatripathi
closed
5 years ago
2
WIP Split sirius
#46
anupriyatripathi
closed
5 years ago
2
ENH: Add ionization mode flag to fingerprint
#45
ElDeveloper
closed
5 years ago
3
Describe handling of temporary directory
#44
ElDeveloper
opened
5 years ago
1
Add parameter for ionization mode
#43
ElDeveloper
closed
5 years ago
0
make classyfire predictions
#42
anupriyatripathi
closed
4 years ago
0
save csi fingerid summaries
#41
anupriyatripathi
closed
5 years ago
1
TST: Fix failing tests
#40
ElDeveloper
closed
5 years ago
1
Add error handling in the subprocess execution
#39
ElDeveloper
opened
5 years ago
0
Distinguish between origin of empty tables in collation step
#38
ElDeveloper
opened
5 years ago
0
module to merge collated fingerprints table
#37
anupriyatripathi
closed
5 years ago
1
update documentation
#36
anupriyatripathi
closed
5 years ago
1
Matchupdate
#35
anupriyatripathi
closed
5 years ago
2
ENH: Add a parameter to modify the jvm's flags
#34
ElDeveloper
closed
5 years ago
1
allow users to save SIRIUS outputs
#33
anupriyatripathi
closed
5 years ago
0
account for situations when tree tips not subset of feature table
#32
anupriyatripathi
closed
5 years ago
0
thresholds for different instruments
#31
anupriyatripathi
closed
4 years ago
0
Control jvm environment variables
#30
ElDeveloper
closed
5 years ago
0
implement tip aggregation
#29
anupriyatripathi
opened
5 years ago
0
collation module WIP
#28
anupriyatripathi
closed
5 years ago
2
Allow users to collate SIRIUS' outputs
#27
ElDeveloper
closed
5 years ago
1
update batch url and add travis badge
#26
anupriyatripathi
closed
5 years ago
1
Install
#25
anupriyatripathi
closed
5 years ago
0
Install instructions and demo data
#24
anupriyatripathi
closed
5 years ago
3
TST: Add tests for plugin instantiation
#23
ElDeveloper
closed
5 years ago
1
Add --processors flag to fingerprint identification
#22
ElDeveloper
closed
5 years ago
0
Add coveragerc file
#21
ElDeveloper
closed
5 years ago
3
Add tests of plugin instantiation
#20
ElDeveloper
closed
5 years ago
0
travis checks
#19
anupriyatripathi
closed
5 years ago
1
make make_hierarchy faster
#18
anupriyatripathi
closed
5 years ago
0
stylistic updates
#17
anupriyatripathi
closed
5 years ago
0
Add parallelization parameters to all the sirius commands
#16
ElDeveloper
closed
5 years ago
0
document all exceptions
#15
anupriyatripathi
closed
5 years ago
0
Match features WIP
#14
anupriyatripathi
closed
5 years ago
1
correcting param name
#13
anupriyatripathi
closed
5 years ago
0
BUG: Fix a few problems with the plugin
#12
ElDeveloper
closed
5 years ago
0
add param choices for sirius
#11
anupriyatripathi
closed
5 years ago
0
Adds the plugin configuration for the two methods
#10
ElDeveloper
closed
5 years ago
0
adding make hierarchy, fingerprinting modules & associated tests
#9
anupriyatripathi
closed
5 years ago
0
Previous
Next