issues
search
biocpp
/
biocpp-io
BioC++ Input/Output library
https://biocpp.github.io
BSD 3-Clause "New" or "Revised" License
8
stars
5
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
[misc] shallow records are not copyable
#77
h-2
closed
1 year ago
0
more dictionary
#76
h-2
closed
1 year ago
0
initial commits after core-0.7.*
#75
h-2
closed
1 year ago
0
Switch to biocpp-core-0.7.0
#74
h-2
closed
1 year ago
0
[fix] empty REF field should be written as "."
#73
h-2
closed
1 year ago
0
[FIX] test .header() and handle move-from gracefully
#72
h-2
closed
1 year ago
0
[misc] add local alleles entries
#71
h-2
closed
1 year ago
0
[misc] de-templatise genomic_region
#70
h-2
closed
1 year ago
0
fasta output and seq::writer
#69
h-2
closed
1 year ago
0
update README and add fastq-writing
#68
h-2
closed
2 years ago
0
[infra] the great replacement
#67
h-2
closed
2 years ago
0
lots of detail
#66
h-2
closed
2 years ago
0
minore fixes and infra
#65
h-2
closed
2 years ago
0
fix biocpp-core version to 0.6.0
#64
h-2
closed
2 years ago
0
Read and write VCF with changing some fields.
#63
Irallia
opened
2 years ago
1
no more tuple-record in the public API
#62
h-2
closed
2 years ago
0
better handling of sync_with_stdio
#61
h-2
closed
2 years ago
0
remove seqan3 🎉
#60
h-2
closed
2 years ago
0
further work on removing SeqAn3
#59
h-2
closed
2 years ago
0
switch to bioc++ data structures and algorithms
#58
h-2
closed
2 years ago
0
fix snippet test
#57
h-2
closed
2 years ago
1
Snippet GCC10 test fails non-reproducibly
#56
h-2
closed
2 years ago
1
various cmake stuff
#55
h-2
closed
2 years ago
0
Structural integration into BioC++
#54
h-2
closed
2 years ago
0
VCF output runs into assertion if ref().size() > 1
#53
joergi-w
closed
2 years ago
2
[INFRA] Update to current seqan3 master
#52
eseiler
closed
2 years ago
1
WIP tabix
#49
h-2
closed
2 years ago
3
[WIP] Ann io
#48
joshuak94
closed
1 year ago
1
Region filtering
#47
h-2
closed
2 years ago
0
Clang format++
#43
h-2
closed
2 years ago
0
[feature] add genomic_region
#42
h-2
closed
2 years ago
0
Swap ternary results.
#41
joshuak94
closed
2 years ago
0
[fix] reading of string or multi-char GENOTYPE fields
#40
h-2
closed
2 years ago
0
[fix] bug in integer-width calculation
#39
h-2
closed
2 years ago
0
[misc] store more record-private-data
#38
h-2
closed
2 years ago
0
[misc] simplify exceptions
#37
h-2
closed
2 years ago
0
Use seqan3::concatenated_sequences
#36
h-2
closed
2 years ago
0
[doc] lots of documentation
#35
h-2
closed
2 years ago
0
[feature] add FastQ reading
#34
h-2
closed
2 years ago
0
[doc] some documentation fixes / improvements
#33
h-2
closed
2 years ago
0
[misc] remove vector_of_char field
#32
h-2
closed
2 years ago
0
[FIX] type_descriptor_is_int & value_type_id_2_type_descriptor must be inline
#31
Irallia
closed
2 years ago
1
[FEATURE] Add filedate to VCF file
#30
Irallia
opened
2 years ago
2
[FIX] Replace include `<seqan3/std/filesystem>` with `<filesystem>`
#29
Irallia
closed
2 years ago
1
[BUG] Failing tests in main branch.
#28
Irallia
opened
2 years ago
1
[BUG] Header not printed if body is empty for ostringstream output.
#27
Irallia
closed
2 years ago
3
submodules
#26
h-2
closed
2 years ago
0
[fix] all missing-value vectors resulted in unknown desc
#25
h-2
closed
2 years ago
0
Cleanup & documentation
#24
h-2
closed
2 years ago
0
Bcf output
#23
h-2
closed
2 years ago
0
Next