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bioimage-io
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collection
Maintains the resources displayed on bioimage.io (Successor to collection-bioimage-io)
https://bioimage-io.github.io/collection/
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Add timestamp to collection.json
#98
FynnBe
opened
5 days ago
0
add generate-run-shell: false to avoid error annotations
#97
FynnBe
closed
5 days ago
0
Error in CI during upload for tensorflow_saved_model_bundle
#96
oeway
closed
5 days ago
4
Source key missing for applications
#95
oeway
closed
5 days ago
3
Error: ENOENT: no such file or directory, lstat '/home/runner/work/_temp/setup-micromamba/micromamba-shell'
#94
FynnBe
opened
2 weeks ago
1
CI stopped due to error "System.IO.IOException: No space left on device"
#93
mese79
opened
1 month ago
7
Add mese79 and veegalinova as reviewers
#92
veegalinova
closed
1 month ago
0
Correct minor bug in biapy compatibility check script
#91
danifranco
closed
1 month ago
0
BiaPy checks failing
#90
FynnBe
closed
1 month ago
3
Update BiaPy workflow
#89
danifranco
closed
1 month ago
0
allow referencing legacy models by their nickname
#88
FynnBe
closed
2 months ago
0
Show more status badges
#87
FynnBe
closed
2 months ago
0
add qin-yu as a reviewer to bioimageio_collection_config.json
#86
qin-yu
closed
2 months ago
0
Adding cfusterbarcelo as reviewer
#85
cfusterbarcelo
closed
2 months ago
0
Test passes locally but fails on CI with identical environments
#84
qin-yu
opened
2 months ago
4
PyTorch version `2.3.1` is converted to `2.3.1+cu121` automatically but CI doesn't use GPU
#83
qin-yu
opened
2 months ago
0
Create the CIs for Icy and deepImageJ using JDLL
#82
carlosuc3m
opened
2 months ago
0
ilastik compatibility checks should be run with an actual ilastik installation
#81
FynnBe
opened
2 months ago
0
add esgomezm as reviewer
#80
esgomezm
closed
2 months ago
0
Make the graph a graph again
#78
k-dominik
closed
2 months ago
1
Independent ilastik checks
#77
FynnBe
closed
3 months ago
0
Update review instructions
#76
k-dominik
closed
3 months ago
1
Added k-dominik to list of reviewers
#75
k-dominik
closed
3 months ago
0
Uploaded model missing on BioImage.IO Model Zoo
#74
qin-yu
opened
3 months ago
0
`bioimageio.core.test_model` passes but GitHub CI fails
#79
qin-yu
closed
2 months ago
6
Add biapy checks
#73
FynnBe
closed
1 month ago
5
save id_map.json instead of 'versions' field
#72
FynnBe
closed
3 months ago
0
Set legacy DOIS in info.json files
#71
FynnBe
opened
3 months ago
1
add ilastik compatibility checks
#70
FynnBe
closed
3 months ago
0
implement compatibility reports
#69
FynnBe
closed
3 months ago
0
Resolve issues from mixing legacy model versions with updated model versions
#68
FynnBe
opened
3 months ago
1
reviewers.json is missing
#67
oeway
closed
3 months ago
1
resolve pip dependencies
#66
FynnBe
closed
4 months ago
0
make sure resource names are unique
#65
FynnBe
closed
4 months ago
0
add constantin as reviewer
#64
FynnBe
closed
5 months ago
0
Missing collection_staged.json in sandbox folder
#63
jmetz
closed
4 months ago
4
bump spec/core
#62
FynnBe
closed
5 months ago
0
convert md to html for zenodo record
#61
FynnBe
closed
5 months ago
0
log collection ci runs
#60
FynnBe
closed
5 months ago
1
Write the run_id to staged log
#59
jmetz
closed
5 months ago
8
Create equivelent of `collection.json` that lists all staged e.g. `staged_collections.json`
#58
jmetz
closed
4 months ago
4
Migrate `animals.json` and `adjectives.json` to this repo?
#57
jmetz
closed
5 months ago
2
block new version upload for non-maintainers
#56
FynnBe
closed
5 months ago
0
Extend linear chat to discussions/threads?
#55
FynnBe
opened
5 months ago
6
Update reupload script
#54
FynnBe
closed
5 months ago
0
Add run url to status
#53
FynnBe
closed
5 months ago
0
Maybe improve our database
#52
FynnBe
opened
5 months ago
3
resolve thumbnail sources
#51
FynnBe
closed
5 months ago
0
generate collection.json's config.url_root
#50
FynnBe
closed
5 months ago
0
Fix collection file
#49
oeway
closed
5 months ago
3
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