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bioinf
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Sibelia
Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.
http://bioinf.spbau.ru/sibelia
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Single contig self alignment - repeats
#191
fungal-spore
closed
1 year ago
3
deletion starting at beginning of contig has position 0 in vcf instead of 1
#190
kcamnairb
opened
3 years ago
0
Sibelia cmake error
#189
divya1srv
opened
4 years ago
2
Couldn't get database name from vcf, please provide it manually
#188
cssulliv
opened
4 years ago
0
Input size is larger than 1gb, can't proceed
#187
devenderarora
opened
4 years ago
2
Option to output all sites in the VCF not just variant sites
#186
kcamnairb
opened
4 years ago
0
Sibelia error: Input is larger than 1 GB, can't proceed
#185
dnarnapr
closed
5 years ago
4
Repeated markers and repeated contigs information are outputted
#184
TsorngWeiWu
closed
5 years ago
2
about the manual : Resulting de Bruijn graph and customer set explanation
#183
TsorngWeiWu
opened
6 years ago
2
sortsequences.py issue
#182
sdewell
opened
6 years ago
1
Improve runtime requirements, bundled 3rd-party code and a way to avoid that
#181
mmokrejs
opened
6 years ago
2
Unable to build from source with GCC 5
#180
SethosII
closed
6 years ago
1
Sibelia not detecting perfect palindrome?
#179
ghost
opened
6 years ago
3
Issue when building from source: lagan
#178
nickp60
closed
6 years ago
7
Broken page: http://bioinf.spbau.ru/sibelia/examples
#177
tseemann
closed
6 years ago
1
C-Sibelia.py does not create VCF file
#176
Rhinogradentia
closed
6 years ago
5
Preventing self search?
#175
ghost
opened
7 years ago
5
recent releases
#174
SethosII
closed
6 years ago
0
Not an issue, just a question. Only bacterial?
#173
MichaelFokinNZ
closed
7 years ago
1
Compilation failure on Ubuntu Server 15
#172
grayfall
closed
7 years ago
7
Add 'V' to the list of permitted characters
#171
iminkin
opened
8 years ago
0
Running on OSX (circa 3.0.5)
#170
DaveRoe
opened
9 years ago
6
An option to ouput synteny blocks in multiple scales
#169
mikolmogorov
opened
10 years ago
0
Make --allstages output as expected
#168
mikolmogorov
opened
10 years ago
0
Turn on --nopostprocess by default
#167
iminkin
opened
10 years ago
0
Add a parameter set to work with more distant genomes
#166
iminkin
closed
10 years ago
0
Add MAF export to the master
#165
iminkin
closed
10 years ago
0
Strange directory strucutre for INSTALL_PATH/share
#164
iminkin
closed
10 years ago
0
Permissions on LAGAN scripts
#163
iminkin
closed
10 years ago
0
Wunused in LAGAN code
#162
iminkin
closed
10 years ago
0
Fix the bug with incorrect strand reporting
#161
iminkin
closed
10 years ago
1
Build failure on OS X 10.8
#160
superbobry
closed
10 years ago
1
Error when compile
#159
kspham
closed
10 years ago
1
Sibelia-3.0.4-Source compilation error (ext_MersenneTwister.h)
#158
vyahhi
closed
10 years ago
1
INSTALL.md with binary distributions
#157
vyahhi
closed
10 years ago
5
No build folder
#156
vyahhi
closed
10 years ago
2
Duplications in "filtered" circos picture
#155
iminkin
closed
7 years ago
0
Order of MLAGAN alignments
#154
iminkin
closed
10 years ago
1
Make Mac binaries for Sibelia 3.0.4
#153
iminkin
closed
10 years ago
0
An error in the sort script
#152
iminkin
closed
10 years ago
1
Error on "BS001_nucleotide.fasta phymatum_All.fasta"
#151
iminkin
closed
10 years ago
0
Release postprocessing script
#150
iminkin
closed
11 years ago
0
Bug with correctboundaries in Sibelia
#149
iminkin
closed
11 years ago
0
Sibelia hangs on sequences with N`s
#148
mikolmogorov
closed
11 years ago
3
Update snpEff
#147
iminkin
closed
11 years ago
0
Make Mac package 3.0.1
#146
iminkin
closed
11 years ago
8
Produce alignment of intergenomic repeats
#145
iminkin
closed
11 years ago
0
Add checking of duplicated sequence ids
#144
iminkin
closed
11 years ago
0
Circos generation
#143
kspham
closed
11 years ago
2
Add flag for specifying K for last graph construction
#142
iminkin
closed
11 years ago
0
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