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bioinfo-chru-strasbourg
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howard
Highly Open Workflow for Annotation & Ranking toward genomic variant Discovery
GNU Affero General Public License v3.0
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Fixes packages versions
#281
antonylebechec
closed
2 days ago
0
fix duckdb version on docker container, by forcing version ==1.0.0
#280
antonylebechec
closed
3 days ago
0
Log messages fixes #266
#279
antonylebechec
closed
3 days ago
0
Transcript bubble view
#278
antonylebechec
closed
4 days ago
0
Add trancript mapping and filter, and manage version #256
#277
antonylebechec
closed
5 days ago
0
Add options to control transcripts view struct #256
#276
antonylebechec
closed
1 week ago
0
Transcript bubble view
#275
antonylebechec
closed
1 week ago
0
Match between Ensembl / Refseq transcript during prioritization step
#274
JbaptisteLam
closed
3 days ago
1
Export only prioritize transcript annotation
#273
JbaptisteLam
closed
3 days ago
2
Error in prioritization step
#272
JbaptisteLam
opened
2 weeks ago
1
Add option only_info #268, docs #4
#271
antonylebechec
closed
3 weeks ago
0
Query tool - disable output print
#270
antonylebechec
closed
3 weeks ago
1
improve type for dbnsfp databases #268, and improve tests
#269
antonylebechec
closed
3 weeks ago
0
Improve type for dbNSFP
#268
antonylebechec
closed
3 weeks ago
2
Improve prioritization adding SQL syntax, PZClass and extra sections …
#267
antonylebechec
closed
3 weeks ago
0
Annotation file not found
#266
JbaptisteLam
closed
3 days ago
1
Add prioritization in SQL format
#265
antonylebechec
closed
3 weeks ago
2
Improve samples identification
#264
antonylebechec
closed
4 weeks ago
0
Manage sample columns in input file
#263
antonylebechec
closed
3 weeks ago
2
Add INFO annotations for transcripts prioritization #256
#262
antonylebechec
closed
1 month ago
0
Sample columns disappear
#261
JbaptisteLam
closed
3 weeks ago
1
Transcript bubble view
#260
antonylebechec
closed
1 month ago
0
Transcript bubble view
#259
antonylebechec
closed
1 month ago
0
GA4GH compatibility
#258
antonylebechec
opened
1 month ago
0
Transcript bubble view
#257
antonylebechec
closed
1 month ago
0
Add transcripts level
#256
antonylebechec
opened
1 month ago
11
Add uniquify option on dbNSFP database generation #254
#255
antonylebechec
closed
2 months ago
0
Add uniquify option for dbNSFP database generation
#254
antonylebechec
closed
2 months ago
1
Change calculation names and options #11
#253
antonylebechec
closed
2 months ago
0
Add snpEff ANN split into multiple fields #11
#252
antonylebechec
closed
2 months ago
0
0.11.0
#251
antonylebechec
closed
2 months ago
0
fix splice #192, docs #4 and tests
#250
antonylebechec
closed
2 months ago
0
Add docs #4 for splice tool
#249
antonylebechec
closed
2 months ago
0
fix snpeff download when databases list is empty #244
#248
antonylebechec
closed
2 months ago
0
Fix splice
#247
antonylebechec
closed
2 months ago
0
howard convert error
#246
JbaptisteLam
closed
3 weeks ago
1
Splice
#245
antonylebechec
closed
2 months ago
0
Auto remove snpEff databases list when empty
#244
antonylebechec
closed
2 months ago
2
Fix genomes folder and genome invalid path error
#243
antonylebechec
closed
3 months ago
1
Fix genomes folder invalid path #240
#242
antonylebechec
closed
3 months ago
0
Update packages
#241
antonylebechec
closed
3 months ago
0
Not able to download databases
#240
zuber-bioinfo
closed
2 months ago
8
Omim annotation issue : gene list not sorted
#239
Melalaoua
opened
4 months ago
1
Potential Python Version Dependency Issue (Resolved)
#238
judefelixt
closed
3 months ago
2
0.10.0
#237
antonylebechec
closed
4 months ago
0
Add snpsift
#236
antonylebechec
closed
4 months ago
0
Add snpsift
#235
antonylebechec
closed
4 months ago
0
Add quick annotation for each specific tool/method
#234
antonylebechec
closed
2 months ago
1
Add snpSift annotation tool
#233
antonylebechec
closed
2 months ago
1
Fix export variant vcf
#232
antonylebechec
closed
4 months ago
0
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