A bacterial identification program for fast identification of bacterial strains from raw sequencing reads
Project home page, pre-computed databases, guide tree and WEB TOOL available from http://bioinfo.ut.ee/strainseeker
StrainSeeker requires both Perl and R to run on a UNIX server. For detailed installing instructions, please visit http://bioinfo.ut.ee/strainseeker/index.php?r=site/page&view=downloadable
Published article in PeerJ: https://peerj.com/articles/3353/
StrainSeeker is licensed under the BSD 3-Clause license (https://opensource.org/licenses/BSD-3-Clause)