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biolink
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biolink-model
Schema and generated objects for biolink data model and upper ontology
https://biolink.github.io/biolink-model/
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Add GeneticCode as an attribute, and a has_genetic_code predicate
#1517
cmungall
opened
19 hours ago
0
prefixes in use not in biolink prefixmap
#1516
sierra-moxon
opened
1 week ago
0
add max research phase enum values
#1515
sierra-moxon
opened
1 week ago
0
Add info to association qualifiers describing which part of the statement they apply to
#1514
Woozl
opened
1 week ago
2
Bump urllib3 from 2.1.0 to 2.2.2
#1513
dependabot[bot]
opened
2 weeks ago
0
fix: flip domain/range for top-level "treats" predicates
#1512
colleenXu
opened
3 weeks ago
0
Is the domain of 'predisposes to condition' (chemical or drug or treatment) too restrictive?
#1511
bill-baumgartner
opened
3 weeks ago
0
Add a description to AgentTypeEnum
#1510
nicholsn
opened
3 weeks ago
0
TRAPI multi-CURIE query use cases semantics
#1509
RichardBruskiewich
opened
1 month ago
0
Bump requests from 2.31.0 to 2.32.0
#1508
dependabot[bot]
closed
1 month ago
0
It seems impossible to instantiate GeneToGoTermAssociation objects using the python classes
#1507
KeithKelleher
opened
1 month ago
0
restore enumeration to use just for denormalized node properties for …
#1506
sierra-moxon
opened
1 month ago
0
fix for Issue #1480
#1505
sierra-moxon
opened
1 month ago
0
Fix biolink:treats (and related) mixin predicate(s) to connect with related_to hierarchy
#1504
RichardBruskiewich
closed
1 month ago
0
What is the Prefix for microRNA?
#1503
codewarrior2000
opened
1 month ago
0
Bump jinja2 from 3.1.3 to 3.1.4
#1502
dependabot[bot]
closed
1 month ago
0
Bump tqdm from 4.66.1 to 4.66.3
#1501
dependabot[bot]
closed
1 month ago
0
make necessary changes to id_prefixes for chemical entity hierarchy
#1500
sierra-moxon
opened
2 months ago
0
Sequence Motif PWMs
#1499
riyavsinha
opened
2 months ago
0
Pathway `preceded_by`/`followed_by`
#1498
riyavsinha
opened
2 months ago
2
Add p_value & adjusted_p_value slots to Association class
#1497
kevinschaper
closed
1 month ago
0
Generated Python/Pydantic Models as Package?
#1496
riyavsinha
opened
2 months ago
1
Additional RO term to has_phenotype
#1495
kevinschaper
closed
2 months ago
0
Prediction Qualifiers
#1494
riyavsinha
opened
2 months ago
2
Move prefix map to src
#1493
gaurav
opened
2 months ago
0
add 'url' property with a description that was difficult to write in …
#1492
sierra-moxon
closed
1 month ago
7
update predicate mapping to refer to qualified predicates for regulates
#1491
sierra-moxon
opened
2 months ago
3
revert semmed mappings for associated_with and administrated_to in root level yaml file
#1490
sierra-moxon
closed
2 months ago
0
4.2.0
#1489
sierra-moxon
closed
2 months ago
0
Bump idna from 3.6 to 3.7
#1488
dependabot[bot]
closed
2 months ago
0
Add klat
#1487
kevinschaper
closed
2 months ago
0
A URL from Reactome database
#1486
codewarrior2000
opened
3 months ago
11
Two discrepencies in `OMIM` prefix
#1485
gaurav
opened
3 months ago
0
`biolink` base namespace does not redirect correctly?
#1484
matentzn
opened
3 months ago
1
Make the hierarchy is-a complete
#1483
cmungall
opened
3 months ago
0
Obsolete Bacterium, or place it correctly
#1482
cmungall
opened
3 months ago
0
Update biolink-model.yaml
#1481
mbrush
closed
3 months ago
0
Inverses of mixin predicates don't establish an is_a path to a "root" mixin
#1480
sierra-moxon
opened
3 months ago
0
Support hpoa annotation format
#1479
sierra-moxon
closed
3 months ago
0
support onset in HPO annotations for monarch, but restrict use of ons…
#1478
sierra-moxon
closed
3 months ago
0
prep for 4.2.0-rc.1 release
#1477
sierra-moxon
closed
3 months ago
0
Update links and autogenerated artifacts in README.md
#1476
deepakunni3
closed
3 months ago
0
fix mislabeled ranges to domain
#1475
sierra-moxon
closed
3 months ago
0
relaxed mappings for a couple of chemicals, made them mappings of Che…
#1474
sierra-moxon
closed
3 months ago
0
remove - skos:relatedMatch as an exact mapping to biolink relate…
#1473
sierra-moxon
closed
3 months ago
0
move semmed administered_to and associated_with to their new respecti…
#1472
sierra-moxon
closed
3 months ago
0
fix order of prefixes for small molecule and chemical entity
#1471
sierra-moxon
closed
3 months ago
0
Knowledge level agent type new dir
#1470
sierra-moxon
closed
3 months ago
0
remove information resource catalog from biolink repository
#1469
sierra-moxon
closed
3 months ago
0
Fix catagory type for pydantic generated models, remove pydantic 1 generation
#1468
sierra-moxon
closed
3 months ago
1
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