enrichment_test() function not returning anything

biolink / ontobio

python library for working with ontologies and ontology associations

https://ontobio.readthedocs.io/en/latest/

BSD 3-Clause "New" or "Revised" License

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enrichment_test() function not returning anything #628

Open kcortes133 opened 1 year ago

kcortes133 commented 1 year ago

I am trying to run the Phenotype_Enrichment notebook.

The AssociationSetFactory function enrichment_test is not returning anything. I have tried using different p-values as well as printing out messages from within the function.

I want to get the most common phenotype ancestors for a set of genes.