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bnprks
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BPCells
Scaling Single Cell Analysis to Millions of Cells
https://bnprks.github.io/BPCells
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[Bpcells x Seurat]Error with jackstraw when data are loaded with BPCells
#62
audrey-gibert
closed
10 months ago
3
Element-wise substract between 2 matrices
#61
buutrg
opened
11 months ago
4
matrix verification
#60
brgew
closed
3 weeks ago
2
installation fails due to not finding HDF5, both in Rstudio and R even though terminal h5cc and system("h5cc") calls work
#59
sfplab
closed
11 months ago
2
Re-licensing of BPCells
#58
wjgreenleaf
closed
1 year ago
0
Issue with BPCells::write_matrix_dir: Column Name Error
#57
lisch7
closed
3 weeks ago
2
"data layers are not joined. Please run JoinLayers"
#56
alice90alice
opened
1 year ago
5
`svds` behaves differently when `storage_order` is "row"
#55
ycli1995
opened
1 year ago
1
RSpectra::eigs()/eigs_sym() compatibility with BPCells
#54
PietroAndrei
opened
1 year ago
4
Data load error
#53
abhiachoudhary
closed
1 year ago
3
`write_matrix_hdf5` crashes when wrapped in other function
#52
ycli1995
closed
1 year ago
8
Submit to CRAN or CONDA
#51
shahrozeabbas
opened
1 year ago
18
Reference mapping
#50
LucaTucciarone
closed
3 weeks ago
2
BPCells to h5AD
#49
jonathan-columbiau
closed
1 year ago
11
Comparison with Scarf
#48
parashardhapola
opened
1 year ago
2
Installation error
#47
wgmao
closed
1 year ago
4
Need some help to extract data from a shared object.
#46
wgmao
closed
1 year ago
4
Markers different in BPCells than in Seurat
#45
mihem
closed
1 year ago
12
Installation under CentOS Linux for R 4.2.2 results in undefined symbol error: H5P_CLS_GROUP_ACCESS_ID_g
#44
bettingr
opened
1 year ago
13
Dimension names lost in dgCMatrix %*% IterableMatrix multiply.
#43
brgew
closed
1 year ago
2
Try adding 'gzip_level' parameter for HDF5 writers
#42
ycli1995
closed
1 year ago
5
Issue installing BPCell on Windows RStudio
#41
sentisci
closed
1 year ago
2
BPCells matrix to sparse matrix
#40
Dario-Rocha
opened
1 year ago
7
write_matrix_dir crashes
#39
ljopp-saile
closed
1 year ago
0
dotplot error
#38
jessicaliu70
closed
3 weeks ago
4
Unsuccessful installation on Windows
#37
bykovam
closed
1 year ago
4
load data
#36
yuq1993
closed
1 year ago
2
Issue with installation
#35
jessicaliu70
closed
1 year ago
2
Installation problem
#34
Dannyxu123
closed
1 year ago
2
support on qs file?
#33
realzehuali
closed
1 year ago
1
Converting ArchR project to BPCells
#32
JLemvig
closed
1 year ago
2
Peak matrix creation with missing chromosomes
#31
bnprks
opened
1 year ago
0
How to choose rownames to use for cellranger .h5 file
#30
Dario-Rocha
closed
1 year ago
5
write_matrix_dir does not write rownames and colnames of a matrix transformed from dgCMatrix
#29
realzehuali
opened
1 year ago
13
write_matrix_dir only writes one layer
#28
aCompanionUnobtrusive
closed
1 year ago
2
Add digits argument to round method.
#27
brgew
closed
1 year ago
6
Unable to open file
#26
ttumkaya
closed
1 year ago
2
export rbind2 and cbind2 methods?
#25
brgew
closed
1 year ago
6
Can't install BPCells on MacOS
#24
Dario-Rocha
closed
1 year ago
9
as(iterablematrix, 'IterableMatrix')
#23
brgew
closed
1 year ago
2
Issue with configure script
#22
bnprks
closed
1 year ago
5
Add binarize method.
#21
brgew
closed
1 year ago
8
Installation on Mac Clang Issue?
#20
samuel-marsh
closed
1 year ago
3
write_matrix_dir error
#19
ChengxiangQiu
closed
1 year ago
5
Installation issue on Mac OS
#18
noriko-hiroi
closed
1 year ago
6
Dense h5ad matrix to BPCells
#17
yuhanH
closed
1 year ago
5
Installation issue (Amazon Linux 2, hdf5 from source)
#16
bnprks
closed
1 year ago
9
Can't install BPCells
#15
sanderslhc
closed
1 year ago
9
cannot install BPcells on ARM mac- cannot find hdf5
#14
chintanparekh2301
closed
1 year ago
6
BPcells compilation
#13
inofechm
closed
1 year ago
1
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