brain-microstructure-exploration-tools abcd-microstructure-pipelines issues

brain-microstructure-exploration-tools / abcd-microstructure-pipelines

Processing pipelines to extract brain microstructure from ABCD Study dMRI

Apache License 2.0

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chore: update pre-commit hooks

#58 pre-commit-ci[bot] closed 1 day ago
0
build(deps): update numpy requirement from <=1.26.4,>=1.26 to >=1.26,<=2.1.0

#57 dependabot[bot] closed 1 week ago
2
chore: update pre-commit hooks

#56 pre-commit-ci[bot] closed 2 weeks ago
0
build(deps): update numpy requirement from <=1.26.4,>=1.26 to >=1.26,<=2.0.1

#55 dependabot[bot] closed 3 weeks ago
2
Start putting together pipeline architecture

#54 ebrahimebrahim opened 3 weeks ago
0
unpin numpy version

#53 ebrahimebrahim opened 4 weeks ago
0
Pin numpy to a version compatible with dipy

#52 ebrahimebrahim closed 4 weeks ago
0
build(deps): bump codecov/codecov-action from 4.4.1 to 4.5.0 in the actions group

#51 dependabot[bot] closed 4 weeks ago
4
chore: update pre-commit hooks

#50 pre-commit-ci[bot] closed 4 weeks ago
0
chore: update pre-commit hooks

#49 pre-commit-ci[bot] closed 2 months ago
0
build(deps): bump codecov/codecov-action from 4.4.0 to 4.4.1 in the actions group

#48 dependabot[bot] closed 3 months ago
1
chore: update pre-commit hooks

#47 pre-commit-ci[bot] closed 3 months ago
0
build(deps): bump codecov/codecov-action from 4.3.1 to 4.4.0 in the actions group

#46 dependabot[bot] closed 3 months ago
0
chore: update pre-commit hooks

#45 pre-commit-ci[bot] closed 3 months ago
0
Come up with a design for how to separate IO

#44 ebrahimebrahim closed 1 month ago
7
cannot publish to pypi with direct HDBET dependency

#43 ebrahimebrahim opened 3 months ago
3
Use pypi instead of test-pypi in CD

#42 ebrahimebrahim closed 3 months ago
9
chore: update pre-commit hooks

#41 pre-commit-ci[bot] closed 3 months ago
0
build(deps): bump codecov/codecov-action from 4.3.0 to 4.3.1 in the actions group

#40 dependabot[bot] closed 3 months ago
1
build(deps): bump sphinx-autobuild from 2024.2.4 to 2024.4.16

#39 dependabot[bot] closed 3 months ago
4
add python to dependabot's duties

#38 ebrahimebrahim closed 3 months ago
1
COMP: Use pinned version on HD-BET fork

#37 allemangD closed 3 months ago
3
chore: update pre-commit hooks

#36 pre-commit-ci[bot] closed 4 months ago
0
Cordon off IO operations

#35 ebrahimebrahim opened 4 months ago
0
Fork HD-BET and adapt it for `masks`

#34 ebrahimebrahim closed 2 months ago
3
ci: fix macos python version

#33 ebrahimebrahim closed 4 months ago
0
26 add more tests for brain masking

#32 ebrahimebrahim closed 3 months ago
4
chore: update pre-commit hooks

#31 pre-commit-ci[bot] closed 4 months ago
1
chore: update pre-commit hooks

#30 pre-commit-ci[bot] closed 4 months ago
0
Update CONTRIBUTING.md

#29 ebrahimebrahim closed 4 months ago
2
build(deps): bump codecov/codecov-action from 4.2.0 to 4.3.0 in the actions group

#28 dependabot[bot] closed 4 months ago
1
Fix apidocs

#27 allemangD closed 4 months ago
4
add more tests for brain masking

#26 ebrahimebrahim closed 3 months ago
1
19 write a unit test for gen masks stuff

#25 ebrahimebrahim closed 4 months ago
2
there is no automatically generated api documentation

#24 ebrahimebrahim closed 4 months ago
0
add pre-commit to dev dependencies

#23 ebrahimebrahim closed 4 months ago
0
test precommit.ci integration

#22 ebrahimebrahim closed 4 months ago
1
build(deps): bump codecov/codecov-action from 4.1.1 to 4.2.0 in the actions group

#21 dependabot[bot] closed 4 months ago
0
rename package to abcdmicro

#20 ebrahimebrahim closed 4 months ago
1
write a unit test for gen_masks stuff

#19 ebrahimebrahim closed 4 months ago
0
add our repo to read-the-docs

#18 ebrahimebrahim closed 4 months ago
1
Add caching to pipelines

#17 allemangD closed 3 months ago
2
Brain extraction

#16 allemangD closed 4 months ago
1
Extraction, concatenation, and conversion to nrrd

#15 allemangD opened 4 months ago
0
Shortern package name

#14 allemangD closed 4 months ago
1
build(deps): bump the actions group with 1 update

#13 dependabot[bot] closed 4 months ago
0
doc: add pip upgrade to local dev env setup guide

#12 ebrahimebrahim closed 5 months ago
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link org to pre-commit.ci service

#11 ebrahimebrahim closed 4 months ago
1
doc: Remove unused conda badge from README

#10 jcfr closed 5 months ago
0
ci: exclude copier config from pre-commit

#9 ebrahimebrahim closed 5 months ago
0