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broadinstitute
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2020-06-01-Evidence-of-state-switching-in-single-cell-drug-response-Broad
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Absolute proportional difference of clusters from controls
#13
hkhawar
opened
3 years ago
3
Proportional differences
#12
hkhawar
opened
3 years ago
1
UMAP_visualization of K-cluster labels
#11
hkhawar
opened
3 years ago
0
Median Cluster cell counts for all drugs at each dose
#10
hkhawar
opened
3 years ago
0
Absolute cluster counts for drug doses
#9
hkhawar
opened
3 years ago
0
K-means clustering and proportional differences in clusters between drug high dose and DMSO controls
#8
hkhawar
opened
3 years ago
0
Compound UMAPs with DMSO
#7
gwaybio
opened
3 years ago
5
Adding single cell normalization notebooks (standardize, spherize, Harmony)
#6
gwaybio
closed
3 years ago
1
Method to consider
#5
gwaybio
opened
3 years ago
0
Consider pycytominer for whitening
#4
gwaybio
opened
3 years ago
0
Harmony batch effect correction
#3
gwaybio
opened
3 years ago
11
Whitening performed to correct batch affects
#2
hkhawar
opened
3 years ago
25
Metadata and Platemap
#1
hkhawar
opened
3 years ago
1