broadinstitute fiss issues

broadinstitute / fiss

FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine

BSD 3-Clause "New" or "Revised" License

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issues

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Implement workflow-level job abort commands

#187 GoldenLA opened 1 month ago
0
FISS v0.16.37

#186 dheiman closed 5 months ago
0
Request to Add Expand_Subworkfow Option to get_workflow_metadata

#185 bshifaw closed 5 months ago
1
Update mop to delete 0-size stderr and stdout files

#184 dheiman opened 10 months ago
0
FISS v0.16.36

#183 dheiman closed 10 months ago
0
pip install failure (firecloud-0.16.35, firecloud-0.16.33, and likely others)

#182 aofarrel closed 1 year ago
1
v0.16.35

#181 dheiman closed 1 year ago
0
v0.16.34

#180 dheiman closed 1 year ago
0
fissfc command `meth_acl` returns a raw object, not a string

#179 TMRHarrison closed 1 year ago
0
v0.16.33

#178 dheiman closed 1 year ago
0
add argument to allow for clock skew in Oauth call

#177 oliverpriebe closed 2 years ago
0
Add CLI commands to get workflow/submission output paths

#176 dheiman opened 2 years ago
1
v0.16.32

#175 dheiman closed 2 years ago
0
Fix Iterable import in python3.10.

#174 DailyDreaming closed 2 years ago
0
Add `get_workflow_cost` [VS-441]

#173 mcovarr closed 2 years ago
0
Cannot import Workspace class

#172 rickymagner closed 2 years ago
1
Allow multiple authorization domains when creating a workspace

#171 amstilp closed 2 years ago
0
`import firecloud.api` broken in Python 3.10

#170 amstilp closed 2 years ago
2
Setting deleteIntermediateOutputFiles=True with create_submission()

#169 kvg closed 2 years ago
0
Consider removing pylint as a dependency of the `firecloud` package.

#168 deflaux closed 2 years ago
1
create any entities on Terra and using fiss

#167 jkobject closed 2 years ago
1
api.py: added get_storage_cost and get_bucket_usage functions

#166 jnktsj closed 2 years ago
0
Update fapi.create_submission to enable Terra features such as delete intermediate output files

#165 bli25 closed 2 years ago
0
api.py: added memory_retry_multiplier parameter to create_submission()

#164 notestaff closed 2 years ago
0
get_workspace_config returns an improperly formed json, differs from Swagger call response

#163 jason-cerrato closed 2 years ago
1
Update *_workspace_config API wrappers to work with dockstore repos

#162 dheiman opened 3 years ago
0
Specifying column attributes in `upload_entities`

#161 SHuang-Broad opened 3 years ago
0
What is 'configuration namespace'

#160 SHuang-Broad opened 3 years ago
2
Mop by workspace job submission id

#159 cchu70 closed 2 years ago
0
mop specific submission argument

#158 cchu70 closed 2 years ago
0
Attr api fixes

#157 SavOK closed 2 years ago
0
Download all final outputs of data model of a workspace

#156 gevro opened 3 years ago
0
v0.16.31

#155 dheiman closed 3 years ago
0
[DFE-299] fissfc attr_list - update behavior for getting workspace attributes

#154 schaluva closed 3 years ago
1
mop deletes files saved in arrays in Terra

#153 bknisbac closed 3 years ago
0
attr_delete not working

#152 AlexBarbera closed 3 years ago
0
changes to mop: allow exclude/include match to full path, add manifest option

#151 mmorgantaylor closed 3 years ago
0
v0.16.30

#150 dheiman closed 3 years ago
0
v0.16.29

#149 dheiman closed 4 years ago
0
Make compatible with the latest setuptools.

#148 DailyDreaming closed 4 years ago
1
Firecloud installation is broken with the latest setuptools==50.0.0.

#147 DailyDreaming closed 4 years ago
2
adding fields parameter to get_workspace()

#146 luke-c-sargent closed 4 years ago
0
v0.16.28

#145 dheiman closed 4 years ago
0
API for billing information

#144 slowkow closed 2 years ago
0
adding 'fields' parameter to list_workspaces() to match swagger API

#143 luke-c-sargent closed 4 years ago
5
firecloud/fiss.py:proj_list() - fix TypeError from appending map to list

#142 notestaff closed 4 years ago
3
get_entities_tsv() with sample_set failing with Error: Embedded NUL in string

#141 schaluva closed 3 years ago
3
v0.16.27

#140 dheiman closed 4 years ago
0
assign root_url = fcconfig.root_url inside method calls

#139 mmorgantaylor closed 4 years ago
1
Setting alternate endpoint (root URL) has no effect (cause and proposed fix provided)

#138 mikebaumann closed 4 years ago
1