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broadinstitute
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lrma-cloud-utils
A python library for interacting with GCS, Cromwell, and Terra
BSD 3-Clause "New" or "Revised" License
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retry on 503s
#33
SHuang-Broad
opened
3 months ago
1
Fixed numpy version to exclude incompatible 2.0 versions.
#32
jonn-smith
opened
3 months ago
5
fix logical error in a key base level utility
#31
SHuang-Broad
closed
5 months ago
1
Added `backup_workspace` function
#30
jonn-smith
opened
6 months ago
2
a time-parsing fix
#29
SHuang-Broad
closed
7 months ago
0
Update intaking several improvements
#28
SHuang-Broad
closed
7 months ago
0
DO NOT CLOSE
#27
SHuang-Broad
opened
1 year ago
6
BREAKING CHANGE: updating submission utils
#26
SHuang-Broad
closed
1 year ago
0
`verify_before_submit` bug: incorrectly checking which entities are actively being processed by the WDL
#25
SHuang-Broad
closed
1 year ago
1
New functionality to cleanup a workspace and a bug fix
#24
SHuang-Broad
closed
1 year ago
0
update emailing capability to allow attaching (PDF, TSV, TXT) files
#23
SHuang-Broad
closed
1 year ago
0
new utility to correct formatting issue of simple Map attributes
#22
SHuang-Broad
closed
1 year ago
0
bring in more goodies from update FISS for workflow submission
#21
SHuang-Broad
closed
1 year ago
0
new basic utility to validate workflow config
#20
SHuang-Broad
closed
1 year ago
0
some refactor cleanup
#19
SHuang-Broad
closed
1 year ago
0
allow fill_in_entity_members to customize member column name
#18
SHuang-Broad
closed
1 year ago
0
BREAKING CHANGE: fetch table operations now return list attributes as…
#17
SHuang-Broad
closed
1 year ago
0
fix a bug where input python dataframe is mutated
#16
SHuang-Broad
closed
1 year ago
0
Fix #9
#15
SHuang-Broad
closed
1 year ago
0
small changes
#14
SHuang-Broad
closed
1 year ago
0
Pin down dependency packages versions
#13
SHuang-Broad
closed
1 year ago
1
Email notification function should allow attachments
#12
SHuang-Broad
closed
1 year ago
1
fetch_existing_set_table need to support list-like attributes
#11
SHuang-Broad
closed
1 year ago
0
fetch tables operations need to unpack simple map attributes
#10
SHuang-Broad
closed
1 year ago
1
Make all FISS/Firecloud-API calls robust to transient errors
#9
SHuang-Broad
closed
1 year ago
0
The fetching functions in table_utils may not handle empty entries in list-like attributes properly
#8
SHuang-Broad
opened
1 year ago
0
Auto list-type parsing option for fetching tables
#7
rlorigro
opened
1 year ago
0
`upload_root_level_table` does not parse Map type correctly
#6
SHuang-Broad
closed
1 year ago
1
`fill_in_entity_members` should have an input for the column name to update
#5
jonn-smith
closed
1 year ago
0
Periodically check Update to FISS new releases
#4
SHuang-Broad
opened
2 years ago
0
uploading to set table doesn't check for duplicates
#3
SHuang-Broad
closed
1 year ago
1
verify_before_submit doesn't check config change of wdl
#2
SHuang-Broad
closed
1 year ago
0
Test test test
#1
SHuang-Broad
opened
2 years ago
0