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broadinstitute / variant-curation-portal

Web application for curating loss of function variants
https://lof.curation.broadinstitute.org
MIT License
4 stars 1 forks source link

Bump the npm_and_yarn group with 17 updates #286

Open dependabot[bot] opened 3 weeks ago

dependabot[bot] commented 3 weeks ago

Bumps the npm_and_yarn group with 17 updates:

Package From To
@babel/traverse 7.12.5 7.24.7
async 2.6.3 2.6.4
browserify-sign 4.2.1 4.2.3
decode-uri-component 0.2.0 0.2.2
eventsource 1.0.7 1.1.2
express 4.17.1 4.19.2
follow-redirects 1.14.7 1.15.6
json5 1.0.1 1.0.2
loader-utils 1.4.0 1.4.2
minimatch 3.0.4 3.1.2
minimist 1.2.5 1.2.8
qs 6.5.2 6.5.3
semver 5.7.1 5.7.2
terser 4.8.0 4.8.1
url-parse 1.5.3 1.5.10
word-wrap 1.2.3 1.2.5
ws 6.2.2 6.2.3

Updates @babel/traverse from 7.12.5 to 7.24.7

Release notes

Sourced from @​babel/traverse's releases.

v7.24.7 (2024-06-05)

:bug: Bug Fix

:house: Internal

  • babel-helpers, babel-runtime-corejs2, babel-runtime-corejs3, babel-runtime

Committers: 7

v7.24.6 (2024-05-24)

Thanks @​amjed-98, @​blakewilson, @​coelhucas, and @​SukkaW for your first PRs!

:bug: Bug Fix

  • babel-helper-create-class-features-plugin, babel-plugin-transform-class-properties
  • babel-core, babel-generator, babel-plugin-transform-modules-commonjs
  • babel-helper-create-class-features-plugin, babel-plugin-proposal-decorators
  • babel-helpers, babel-plugin-proposal-decorators, babel-runtime-corejs3
    • #16483 Fix: throw TypeError if addInitializer is called after finished (@​JLHwung)
  • babel-parser, babel-plugin-transform-typescript

:house: Internal

  • babel-core, babel-helpers, babel-plugin-transform-runtime, babel-preset-env, babel-runtime-corejs2, babel-runtime-corejs3, babel-runtime
  • babel-helpers
  • babel-cli, babel-helpers, babel-plugin-external-helpers, babel-plugin-proposal-decorators, babel-plugin-transform-class-properties, babel-plugin-transform-modules-commonjs, babel-plugin-transform-modules-systemjs, babel-plugin-transform-runtime, babel-preset-env, babel-runtime-corejs2, babel-runtime-corejs3, babel-runtime
  • babel-parser, babel-traverse
  • Other

... (truncated)

Changelog

Sourced from @​babel/traverse's changelog.

v7.24.7 (2024-06-05)

:bug: Bug Fix

:house: Internal

  • babel-helpers, babel-runtime-corejs2, babel-runtime-corejs3, babel-runtime

v7.24.6 (2024-05-24)

:bug: Bug Fix

  • babel-helper-create-class-features-plugin, babel-plugin-transform-class-properties
  • babel-core, babel-generator, babel-plugin-transform-modules-commonjs
  • babel-helper-create-class-features-plugin, babel-plugin-proposal-decorators
  • babel-helpers, babel-plugin-proposal-decorators, babel-runtime-corejs3
    • #16483 Fix: throw TypeError if addInitializer is called after finished (@​JLHwung)
  • babel-parser, babel-plugin-transform-typescript

:house: Internal

  • babel-core, babel-helpers, babel-plugin-transform-runtime, babel-preset-env, babel-runtime-corejs2, babel-runtime-corejs3, babel-runtime
  • babel-helpers
  • babel-cli, babel-helpers, babel-plugin-external-helpers, babel-plugin-proposal-decorators, babel-plugin-transform-class-properties, babel-plugin-transform-modules-commonjs, babel-plugin-transform-modules-systemjs, babel-plugin-transform-runtime, babel-preset-env, babel-runtime-corejs2, babel-runtime-corejs3, babel-runtime
  • babel-parser, babel-traverse
  • Other

v7.24.5 (2024-04-29)

:bug: Bug Fix

  • babel-plugin-transform-classes, babel-traverse
  • babel-helpers, babel-plugin-proposal-explicit-resource-management, babel-runtime-corejs3

:nail_care: Polish

  • babel-parser

... (truncated)

Commits


Updates async from 2.6.3 to 2.6.4

Changelog

Sourced from async's changelog.

v2.6.4

  • Fix potential prototype pollution exploit (#1828)
Commits
Maintainer changes

This version was pushed to npm by hargasinski, a new releaser for async since your current version.


Updates browserify-sign from 4.2.1 to 4.2.3

Changelog

Sourced from browserify-sign's changelog.

v4.2.3 - 2024-03-05

Commits

v4.2.2 - 2023-10-25

Fixed

Commits

  • Only apps should have lockfiles 09a8995
  • [eslint] switch to eslint 83fe463
  • [meta] add npmignore and auto-changelog 4418183
  • [meta] fix package.json indentation 9ac5a5e
  • [Tests] migrate from travis to github actions d845d85
  • [Fix] sign: throw on unsupported padding scheme 8767739
  • [Fix] properly check the upper bound for DSA signatures 85994cd
  • [Tests] handle openSSL not supporting a scheme f5f17c2
  • [Deps] update bn.js, browserify-rsa, elliptic, parse-asn1, readable-stream, safe-buffer a67d0eb
  • [Dev Deps] update nyc, standard, tape cc5350b
  • [Tests] always run coverage; downgrade nyc 75ce1d5
  • [meta] add safe-publish-latest dcf49ce
  • [Tests] add npm run posttest 75dd8fd
  • [Dev Deps] update tape 3aec038
  • [Tests] skip unsupported schemes 703c83e
  • [Tests] node < 6 lacks array includes 3aa43cf
  • [Dev Deps] fix eslint range 98d4e0d
Commits
  • bf2c3ec v4.2.3
  • 9247adf [patch] widen support to 0.12
  • f427270 [Deps] update `parse-asn1
  • 87f3a35 [Dev Deps] update aud, npmignore, tape
  • fb261ce [Deps] update elliptic
  • 4d0ee49 [patch] drop minimum node support to v1
  • 9e2bf12 [Deps] pin hash-base to ~3.0, due to a breaking change
  • 168e16f [Deps] pin elliptic due to a breaking change
  • 37a4758 [actions] remove redundant finisher
  • 4af5a90 v4.2.2
  • Additional commits viewable in compare view
Maintainer changes

This version was pushed to npm by ljharb, a new releaser for browserify-sign since your current version.


Updates decode-uri-component from 0.2.0 to 0.2.2

Release notes

Sourced from decode-uri-component's releases.

v0.2.2

  • Prevent overwriting previously decoded tokens 980e0bf

https://github.com/SamVerschueren/decode-uri-component/compare/v0.2.1...v0.2.2

v0.2.1

  • Switch to GitHub workflows 76abc93
  • Fix issue where decode throws - fixes #6 746ca5d
  • Update license (#1) 486d7e2
  • Tidelift tasks a650457
  • Meta tweaks 66e1c28

https://github.com/SamVerschueren/decode-uri-component/compare/v0.2.0...v0.2.1

Commits


Updates eventsource from 1.0.7 to 1.1.2

Changelog

Sourced from eventsource's changelog.

1.1.2

  • Inline origin resolution, drops original dependency (#281 Espen Hovlandsdal)

1.1.1

  • Do not include authorization and cookie headers on redirect to different origin (#273 Espen Hovlandsdal)

1.1.0

  • Improve performance for large messages across many chunks (#130 Trent Willis)
  • Add createConnection option for http or https requests (#120 Vasily Lavrov)
  • Support HTTP 302 redirects (#116 Ryan Bonte)
  • Prevent sequential errors from attempting multiple reconnections (#125 David Patty)
  • Add new to correct test (#111 Stéphane Alnet)
  • Fix reconnections attempts now happen more than once (#136 Icy Fish)
Commits


Updates express from 4.17.1 to 4.19.2

Release notes

Sourced from express's releases.

4.19.2

What's Changed

Full Changelog: https://github.com/expressjs/express/compare/4.19.1...4.19.2

4.19.1

What's Changed

Full Changelog: https://github.com/expressjs/express/compare/4.19.0...4.19.1

4.19.0

What's Changed

New Contributors

Full Changelog: https://github.com/expressjs/express/compare/4.18.3...4.19.0

4.18.3

Main Changes

  • Fix routing requests without method
  • deps: body-parser@1.20.2
    • Fix strict json error message on Node.js 19+
    • deps: content-type@~1.0.5
    • deps: raw-body@2.5.2

Other Changes

... (truncated)

Changelog

Sourced from express's changelog.

4.19.2 / 2024-03-25

  • Improved fix for open redirect allow list bypass

4.19.1 / 2024-03-20

  • Allow passing non-strings to res.location with new encoding handling checks

4.19.0 / 2024-03-20

  • Prevent open redirect allow list bypass due to encodeurl
  • deps: cookie@0.6.0

4.18.3 / 2024-02-29

  • Fix routing requests without method
  • deps: body-parser@1.20.2
    • Fix strict json error message on Node.js 19+
    • deps: content-type@~1.0.5
    • deps: raw-body@2.5.2
  • deps: cookie@0.6.0
    • Add partitioned option

4.18.2 / 2022-10-08

  • Fix regression routing a large stack in a single route
  • deps: body-parser@1.20.1
    • deps: qs@6.11.0
    • perf: remove unnecessary object clone
  • deps: qs@6.11.0

4.18.1 / 2022-04-29

  • Fix hanging on large stack of sync routes

4.18.0 / 2022-04-25

  • Add "root" option to res.download
  • Allow options without filename in res.download
  • Deprecate string and non-integer arguments to res.status
  • Fix behavior of null/undefined as maxAge in res.cookie
  • Fix handling very large stacks of sync middleware
  • Ignore Object.prototype values in settings through app.set/app.get

... (truncated)

Commits
  • 04bc627 4.19.2
  • da4d763 Improved fix for open redirect allow list bypass
  • 4f0f6cc 4.19.1
  • a003cfa Allow passing non-strings to res.location with new encoding handling checks f...
  • a1fa90f fixed un-edited version in history.md for 4.19.0
  • 11f2b1d build: fix build due to inconsistent supertest behavior in older versions
  • 084e365 4.19.0
  • 0867302 Prevent open redirect allow list bypass due to encodeurl
  • 567c9c6 Add note on how to update docs for new release (#5541)
  • 69a4cf2 deps: cookie@0.6.0
  • Additional commits viewable in compare view
Maintainer changes

This version was pushed to npm by wesleytodd, a new releaser for express since your current version.


Updates follow-redirects from 1.14.7 to 1.15.6

Commits
  • 35a517c Release version 1.15.6 of the npm package.
  • c4f847f Drop Proxy-Authorization across hosts.
  • 8526b4a Use GitHub for disclosure.
  • b1677ce Release version 1.15.5 of the npm package.
  • d8914f7 Preserve fragment in responseUrl.
  • 6585820 Release version 1.15.4 of the npm package.
  • 7a6567e Disallow bracketed hostnames.
  • 05629af Prefer native URL instead of deprecated url.parse.
  • 1cba8e8 Prefer native URL instead of legacy url.resolve.
  • 72bc2a4 Simplify _processResponse error handling.
  • Additional commits viewable in compare view


Updates json5 from 1.0.1 to 1.0.2

Release notes

Sourced from json5's releases.

v1.0.2

  • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295). This has been backported to v1. (#298)
Changelog

Sourced from json5's changelog.

Unreleased [code, diff]

v2.2.3 [code, diff]

  • Fix: json5@2.2.3 is now the 'latest' release according to npm instead of v1.0.2. (#299)

v2.2.2 [code, diff]

  • Fix: Properties with the name __proto__ are added to objects and arrays. (#199) This also fixes a prototype pollution vulnerability reported by Jonathan Gregson! (#295).

v2.2.1 [code, diff]

  • Fix: Removed dependence on minimist to patch CVE-2021-44906. (#266)

v2.2.0 [code, diff]

  • New: Accurate and documented TypeScript declarations are now included. There is no need to install @types/json5. (#236, #244)

v2.1.3 [code, diff]

  • Fix: An out of memory bug when parsing numbers has been fixed. (#228, #229)

v2.1.2 [code, diff]

... (truncated)

Commits


Updates loader-utils from 1.4.0 to 1.4.2

Release notes

Sourced from loader-utils's releases.

v1.4.2

1.4.2 (2022-11-11)

Bug Fixes

v1.4.1

1.4.1 (2022-11-07)

Bug Fixes

Changelog

Sourced from loader-utils's changelog.

1.4.2 (2022-11-11)

Bug Fixes

1.4.1 (2022-11-07)

Bug Fixes

Commits


Updates minimatch from 3.0.4 to 3.1.2

Commits


Updates minimist from 1.2.5 to 1.2.8

Changelog

Sourced from minimist's changelog.

v1.2.8 - 2023-02-09

Merged

Fixed

Commits

  • Merge tag 'v0.2.3' a026794
  • [eslint] fix indentation and whitespace 5368ca4
  • [eslint] fix indentation and whitespace e5f5067
  • [eslint] more cleanup 62fde7d
  • [eslint] more cleanup 36ac5d0
  • [meta] add auto-changelog 73923d2
  • [actions] add reusable workflows d80727d
  • [eslint] add eslint; rules to enable later are warnings 48bc06a
  • [eslint] fix indentation 34b0f1c
  • [readme] rename and add badges 5df0fe4
  • [Dev Deps] switch from covert to nyc a48b128
  • [Dev Deps] update covert, tape; remove unnecessary tap f0fb958
  • [meta] create FUNDING.yml; add funding in package.json 3639e0c
  • [meta] use npmignore to autogenerate an npmignore file be2e038
  • Only apps should have lockfiles 282b570
  • isConstructorOrProto adapted from PR ef9153f
  • [Dev Deps] update @ljharb/eslint-config, aud 098873c
  • [Dev Deps] update @ljharb/eslint-config, aud 3124ed3
  • [meta] add safe-publish-latest 4b927de
  • [Tests] add aud in posttest b32d9bd
  • [meta] update repo URLs f9fdfc0
  • [actions] Avoid 0.6 tests due to build failures ba92fe6
  • [Dev Deps] update tape 950eaa7
  • [Dev Deps] add missing npmignore dev dep 3226afa
  • Merge tag 'v0.2.2' 980d7ac

v1.2.7 - 2022-10-10

Commits

... (truncated)

Commits
  • 6901ee2 v1.2.8
  • a026794 Merge tag 'v0.2.3'
  • c0b2661 v0.2.3
  • 63b8fee [Fix] Fix long option followed by single dash (#17)
  • 72239e6 [Tests] Remove duplicate test (#12)
  • 34b0f1c [eslint] fix indentation
  • 3226afa [Dev Deps] add missing npmignore dev dep
  • 098873c [Dev Deps] update @ljharb/eslint-config, aud
  • 9ec4d27 [Fix] Fix long option followed by single dash
  • ba92fe6 [actions] Avoid 0.6 tests due to build failures
  • Additional commits viewable in compare view
Maintainer changes

This version was pushed to npm by ljharb, a new releaser for minimist since your current version.


Updates qs from 6.5.2 to 6.5.3

Changelog

Sourced from qs's changelog.

6.5.3

  • [Fix] parse: ignore __proto__ keys (#428)
  • [Fix] utils.merge: avoid a crash with a null target and a truthy non-array source
  • [Fix] correctly parse nested arrays
  • [Fix] stringify: fix a crash with strictNullHandling and a custom filter/serializeDate (#279)
  • [Fix] utils: merge: fix crash when source is a truthy primitive & no options are provided
  • [Fix] when parseArrays is false, properly handle keys ending in []
  • [Fix] fix for an impossible situation: when the formatter is called with a non-string value
  • [Fix] utils.merge: avoid a crash with a null target and an array source
  • [Refactor] utils: reduce observable [[Get]]s
  • [Refactor] use cached Array.isArray
  • [Refactor] stringify: Avoid arr = arr.concat(...), push to the existing instance (#269)
  • [Refactor] parse: only need to reassign the var once
  • [Robustness] stringify: avoid relying on a global undefined (#427)
  • [readme] remove travis badge; add github actions/codecov badges; update URLs
  • [Docs] Clean up license text so it’s properly detected as BSD-3-Clause
  • [Docs] Clarify the need for "arrayLimit" option
  • [meta] fix README.md (#399)
  • [meta] add FUNDING.yml
  • [actions] backport actions from main
  • [Tests] always use String(x) over x.toString()
  • [Tests] remove nonexistent tape option
  • [Dev Deps] backport from main
Commits
  • 298bfa5 v6.5.3
  • ed0f5dc [Fix] parse: ignore __proto__ keys (#428)
  • 691e739 [Robustness] stringify: avoid relying on a global undefined (#427)
  • sjahl commented 3 weeks ago

    @dependabot rebase

sjahl commented 3 weeks ago

@dependabot recreate