calico baskerville issues

calico / baskerville

Machine learning methods for DNA sequence analysis.

Apache License 2.0

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issues

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in silico deletion script: hound_isd_bed

#43 anyakors opened 6 days ago
0
relax

#42 davek44 opened 3 weeks ago
0
metrics tests

#41 davek44 closed 3 weeks ago
0
add transfer modules

#40 hy395 opened 4 weeks ago
0
Default of poisson_multinomial throws DivisionByZero Error

#39 tdsone closed 3 months ago
2
Clarification of poisson_multinomial (possibly returns wrong shape?)

#38 tdsone closed 3 months ago
2
Discrepancies Between Genome Sequences from BED Coordinates and tfrecords in Basenji Dataset

#37 yangzhao1230 opened 3 months ago
4
Train log gcs

#36 lruizcalico closed 3 months ago
0
Stitch pos

#35 davek44 closed 3 months ago
1
Adding tensorboard for training

#34 lruizcalico closed 3 months ago
1
spatial weighting for poisson multinomial

#33 davek44 closed 4 months ago
0
port dataset code

#32 davek44 closed 4 months ago
0
1-hot encode in parallel

#31 davek44 closed 4 months ago
0
fix black format

#30 lruizcalico closed 4 months ago
0
float16 option

#29 davek44 closed 4 months ago
0
Added option to ignore soft-clip when undoing transforms.

#28 johli closed 4 months ago
0
ML newbie trying to run Baskerville

#27 jesspeers opened 5 months ago
8
gene-specific SNP scoring

#26 davek44 closed 5 months ago
0
readd changes for ensemble before optimizing

#25 lruizcalico closed 4 months ago
0
Revert "Ensemble RC before TensorRT optimization"

#24 lruizcalico closed 5 months ago
0
Ensemble RC before TensorRT optimization

#23 davek44 closed 5 months ago
0
SNP scoring optimizations

#22 davek44 closed 5 months ago
0
avoid tensorflow reduce mean

#21 davek44 closed 6 months ago
0
use toml instead of setup.cfg

#20 lruizcalico closed 7 months ago
0
Mount

#19 lruizcalico closed 7 months ago
0
Mount

#18 lruizcalico closed 7 months ago
0
indel stitch

#17 davek44 closed 7 months ago
0
Stitch - ensemble shift fix

#16 anyakors closed 7 months ago
0
Tensorrt

#15 lruizcalico closed 7 months ago
0
Stitch

#14 anyakors closed 7 months ago
0
add support to tensorrt

#13 lruizcalico closed 7 months ago
0
Ism

#12 davek44 closed 9 months ago
0
Sphinx doc

#11 lruizcalico closed 9 months ago
0
add sphinx doc

#10 lruizcalico closed 9 months ago
0
fix pyproject.toml for setuptools update

#9 lruizcalico closed 10 months ago
0
Indel

#8 davek44 closed 10 months ago
0
unet block renaming

#7 davek44 closed 10 months ago
0
New seqnn

#6 lruizcalico closed 11 months ago
0
added possibility of ensemble with one shift

#5 anyakors closed 11 months ago
1
DEN-573: Add dockerfile for integration tests.

#4 nalien-calico closed 1 year ago
0
add-gcs

#3 lruizcalico closed 1 year ago
1
Snpclust

#2 davek44 closed 1 year ago
1
snp test

#1 davek44 opened 1 year ago
5