caltechlibrary / caltechthesis

A test version of CaltechTHESIS on InvenioRDM
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CaltechTHESIS

This is the source repository for the in-development InvenioRDM version CaltechTHESIS, Caltech's Thesis Repository. It utilizes the latest version of the InvenioRDM repository platform, but is still in development and does not reflect a production setup.

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Table of contents

Introduction

This repository was initialized following the InvenioRDM instructions/. It was then customized to meet the needs of the Caltech community. This is only one deployment example, and may or not be appropriate for your specific institution and IT setup.

Installation

We currently deploy CaltechTHESIS on a m7i-flex.xlarge AWS EC2 instance with Ubuntu 22.04. We use this cloud-init file to do most of the initial setup.

Install NVM

We haven't gotten NVM to install with cloud-init. Run curl -o- https://raw.githubusercontent.com/nvm-sh/nvm/v0.39.1/install.sh | bash, then reboot and type nvm install 16

Install InvenioRDM

Clone this repository into /Sites, then go to that directory. We need a local copy of idutils with local identifiers

git clone https://github.com/caltechlibrary/idutils.git
cd idutils
git checkout authors
cd ../caltechthesis
pipenv install
invenio-cli packages install ../idutils
invenio-cli services setup --no-demo-data

You'll need a .env file in /Sites, which includes secrets:

INVENIO_DATACITE_PASSWORD=
INVENIO_SECRET_KEY=
INVENIO_S3_ACCESS_KEY_ID=
INVENIO_S3_SECRET_ACCESS_KEY=
INVENIO_LOGGING_CONSOLE_LEVEL=
INVENIO_MAIL_PASSWORD=

Edit /etc/sysctl.conf and add vm.max_map_count=262144

This configuration uses S3 for storage. You need to change the bucket name with

pipenv run invenio files location s3-default s3://caltechthesis --default

Add access to the admin panel pipenv run invenio access allow administration-access role admin

Get the latest ROR data from https://doi.org/10.5281/zenodo.6347574 and import the funders vocabulary with

wget https://zenodo.org/record/7038913/files/v1.5-2022-08-31-ror-data.zip?download=1 -O ror.zip
pipenv run invenio vocabularies import --vocabulary funders --origin "/Sites/caltechdata/ror.zip"

We have a local awards list, generated by https://github.com/caltechlibrary/irdmtools awards2vocabulary.py. Load into RDM with

pipenv run invenio vocabularies import --vocabulary awards --filepath ./vocabularies-future.yaml
``

We have a local CaltechPEOPLE list, which is loaded with

pipenv run invenio vocabularies import --vocabulary names --filepath ./vocabularies-future.yaml


### Domain Configuration

You'll need a domain name, and set an A record to point the domain name to your
AWS instance.

Move nginx.conf to `/etc/nginx/sites-enabled/default`

Copy redirect-map.conf to `/etc/nginx/`

Get a certificate with `sudo certbot --nginx`

Restart nginx with `sudo service nginx restart`

### Systemctl

We need three services to run InvenioRDM. Set them up with

sudo cp rdm_rest.service /etc/systemd/system/. sudo cp rdm.service /etc/systemd/system/. sudo cp rdm_celery.service /etc/systemd/system/. sudo systemctl daemon-reload sudo systemctl start rdm sudo systemctl start rdm_rest sudo systemctl start rdm_celery


You should now have a InvenioRDM repository fully running!

## Usage

### Stopping InvenioRDM

cd /Sites/caltechdata sudo systemctl stop nginx sudo systemctl stop rdm sudo systemctl stop rdm_rest sudo systemctl stop rdm_celery invenio-cli services stop


### Starting InvenioRDM

cd /Sites/caltechdata invenio-cli services start sudo systemctl start rdm_celery sudo systemctl start rdm_rest sudo systemctl start rdm sudo systemctl start nginx



## Known issues and limitations

These insttallation instructions are intended for this specific Caltech
deployment, and you may need to modify them to work for your specific
configuration.

## Getting help

Please open an issue or pull request if you notice any problems or have
questions.

## Contributing

Please see our [Contributing
guidelines](https://github.com/caltechlibrary/caltechdata/blob/main/CONTRIBUTING.md)

## License

Software produced by the Caltech Library is Copyright © 2024 California Institute of Technology.  This software is freely distributed under a BSD/MIT type license.  Please see the [LICENSE](LICENSE) file for more information.

## Authors and history

Tom Morrell led the CaltechDATA InvenioRDM development. Tommy Keswick helped with
 themeing and site design. TUGraz and all the other
InvenioRDM partners were instrumental in getting all the customizations
working.

## Acknowledgments

This work was funded by the California Institute of Technology Library.

<div align="center">
  <br>
  <a href="https://www.caltech.edu">
    <img width="100" height="100" src="https://raw.githubusercontent.com/caltechlibrary/template/main/.graphics/caltech-round.png">
  </a>
</div>