benchmarking dib-lab software
sourmash_gather
├───.snakemake
├───input
│ ├───hu (sig files)
│ └───reports
├───output
│ ├───flame_out
│ │ ├───csv_files
│ │ ├───reports
│ │ └───svg_files
│ ├───misc (output from trials)
│ └───smk_out
│ ├───bench (metrics data)
│ └───gather
└───workflow
└───smk (snakefile)
└───bench_graphs.ipynb (graphs of metrics)
└───flamegraph_job.sh (flamegraph)
└─── gather_bench.sh
└───sketch-fq.sh (sketch sigs)