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cfe-lab
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CFEIntact
A bioinformatics tool for detecting defects in HIV-1 proviral sequences.
https://cfe-lab.github.io/CFEIntact
MIT License
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Bump rexml from 3.3.4 to 3.3.6 in /docs
#29
dependabot[bot]
closed
3 weeks ago
0
Bump github-pages from 231 to 232 in /docs
#28
dependabot[bot]
closed
1 month ago
2
Bump jekyll from 3.9.5 to 3.10.0 in /docs
#27
dependabot[bot]
closed
1 month ago
0
Bump rexml from 3.3.2 to 3.3.3 in /docs
#26
dependabot[bot]
closed
1 month ago
2
Display more regions in `regions.csv`
#25
Donaim
opened
1 month ago
0
Bump rexml from 3.2.8 to 3.3.2 in /docs
#24
dependabot[bot]
closed
1 month ago
0
Add type annotations to Biopython code
#23
Donaim
opened
1 month ago
0
Improve ORF coordinates detection
#22
Donaim
opened
1 month ago
1
Distinguish between "too many deletions" and "mutated start/stop codon"
#21
Donaim
closed
1 month ago
0
Present output in a quality-control manner
#20
Donaim
opened
3 months ago
0
Bump rexml from 3.2.6 to 3.2.8 in /docs
#19
dependabot[bot]
closed
3 months ago
0
Bump nokogiri from 1.16.2 to 1.16.5 in /docs
#18
dependabot[bot]
closed
4 months ago
0
Bump nokogiri from 1.16.2 to 1.16.5 in /docs
#17
dependabot[bot]
closed
4 months ago
5
Test install on various ubuntu versions
#16
Donaim
closed
4 months ago
1
Type error with resources on some environments
#15
Donaim
closed
4 months ago
1
Bump scipy from 1.11.2 to 1.13.0
#14
dependabot[bot]
closed
5 months ago
0
Adjust deletion tolerence scores
#13
Donaim
closed
5 months ago
1
Report more context for MSD and PSI type errors
#12
Donaim
closed
5 months ago
1
Bump github-pages and jekyll in /docs
#4
dependabot[bot]
closed
6 months ago
1
Bump nokogiri from 1.14.3 to 1.16.2 in /docs
#3
dependabot[bot]
closed
6 months ago
2
Bump commonmarker from 0.23.9 to 0.23.10 in /docs
#2
dependabot[bot]
closed
6 months ago
2
Bump activesupport from 7.0.4.3 to 7.1.3.2 in /docs
#1
dependabot[bot]
closed
6 months ago
2
Verify subtypes sequences
#5
Donaim
opened
11 months ago
0
Output plots
#6
Donaim
closed
1 month ago
1
Add concordance output statistics
#7
Donaim
opened
11 months ago
0
Purge subtypes that do not map nicely to HXB2
#8
Donaim
opened
11 months ago
1
Choose the best alignment in case of `--subtype=all`
#10
Donaim
closed
12 months ago
1
Investigate why `PSINOTFOUND_ERROR` is not used
#9
Donaim
closed
5 months ago
1
Fix `mafft` wrapper
#11
Donaim
closed
1 year ago
1