cggh / scikit-allel

A Python package for exploring and analysing genetic variation data
MIT License
287 stars 49 forks source link

Scheduled monthly dependency update for June #362

Closed pyup-bot closed 3 years ago

pyup-bot commented 3 years ago

Update numpy from 1.20.2 to 1.20.3.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/numpy - Homepage: https://www.numpy.org

Update dask[array] from 2021.4.1 to 2021.5.1.

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Links - PyPI: https://pypi.org/project/dask - Repo: https://github.com/dask/dask/

Update matplotlib from 3.4.1 to 3.4.2.

Changelog ### 3.4.2 ``` This is the second bugfix release of the 3.4.x series. This release contains several critical bug-fixes: * Generate wheels usable on older PyPy7.3.{0,1} * Fix compatibility with Python 3.10 * Add `subplot_mosaic` Axes in the order the user gave them to us * Correctly handle 'none' *facecolors* in `do_3d_projection` * Ensure that Matplotlib is importable even if there's no HOME * Fix `CenteredNorm` with *halfrange* * Fix `bar_label` for bars with NaN values * Fix clip paths when zoomed such that they are outside the figure * Fix creation of `RangeSlider` with *valinit* * Fix handling of "d" glyph in backend_ps, fixing EPS output * Fix handling of datetime coordinates in `pcolormesh` with Pandas * Fix processing of some `errorbar` arguments * Fix removal of shared polar Axes * Fix resetting grid visibility * Fix subfigure indexing error and tight bbox * Fix textbox cursor color * Fix TkAgg event loop error on window close * Ignore errors for sip with no setapi (Qt4Agg import errors) ```
Links - PyPI: https://pypi.org/project/matplotlib - Changelog: https://pyup.io/changelogs/matplotlib/ - Homepage: https://matplotlib.org

Update zarr from 2.8.1 to 2.8.3.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/zarr - Repo: https://github.com/zarr-developers/zarr-python

Update pomegranate from 0.14.4 to 0.14.5.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/pomegranate - Homepage: http://pypi.python.org/pypi/pomegranate/

Update ipython from 7.23.0 to 7.24.0.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/ipython - Changelog: https://pyup.io/changelogs/ipython/ - Homepage: https://ipython.org
pyup-bot commented 3 years ago

Closing this in favor of #365