scikit-allelA Python package for exploratory analysis of large scale genetic variation data.
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Development status
Please note that scikit-allel is no longer under active development
and is now in "maintenance-only" mode. The intended successor
project is sgkit <https://github.com/pystatgen/sgkit> (the Statistical
Genetics Toolkit) which should support all the functionality of sckit-allel,
but provide better scaling, performance and maintainability.
Sgkit is not yet at feature parity with scikit-allel and is therefore
not ready for all applications, but we welcome contributions <https://pystatgen.github.io/sgkit/latest/contributing.html>!