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cggh / scikit-allel

A Python package for exploring and analysing genetic variation data
MIT License
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Scheduled monthly dependency update for December #371

Closed pyup-bot closed 2 years ago

pyup-bot commented 2 years ago

Update numpy from 1.21.2 to 1.21.4.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/numpy - Homepage: https://www.numpy.org

Update dask[array] from 2021.9.1 to 2021.11.2.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/dask - Repo: https://github.com/dask/dask/

Update scipy from 1.7.1 to 1.7.3.

Changelog ### 1.7.2 ``` compared to `1.7.1`. Notably, the release includes wheels for Python `3.10`, and wheels are now built with a newer version of OpenBLAS, `0.3.17`. Python `3.10` wheels are provided for MacOS x86_64 (thin, not universal2 or arm64 at this time), and Windows/Linux 64-bit. Many wheels are now built with newer versions of manylinux, which may require newer versions of pip. Authors ======= * Peter Bell * da-woods + * Isuru Fernando * Ralf Gommers * Matt Haberland * Nicholas McKibben * Ilhan Polat * Judah Rand + * Tyler Reddy * Pamphile Roy * Charles Harris * Matti Picus * Hugo van Kemenade * Jacob Vanderplas A total of 14 people contributed to this release. People with a "+" by their names contributed a patch for the first time. This list of names is automatically generated, and may not be fully complete. ```
Links - PyPI: https://pypi.org/project/scipy - Changelog: https://pyup.io/changelogs/scipy/ - Repo: https://github.com/scipy/scipy/releases - Homepage: https://www.scipy.org

Update matplotlib from 3.4.3 to 3.5.0.

Changelog
Links - PyPI: https://pypi.org/project/matplotlib - Changelog: https://pyup.io/changelogs/matplotlib/ - Homepage: https://matplotlib.org

Update pandas from 1.3.3 to 1.3.4.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/pandas - Homepage: https://pandas.pydata.org

Update scikit-learn from 1.0 to 1.0.1.

Changelog ### 1.0.1 ``` We're happy to announce the 1.0.1 release with several bugfixes: You can see the changelog here: https://scikit-learn.org/dev/whats_new/v1.0.html#version-1-0-1 You can upgrade with pip as usual: pip install -U scikit-learn The conda-forge builds will be available shortly, which you can then install using: conda install -c conda-forge scikit-learn ```
Links - PyPI: https://pypi.org/project/scikit-learn - Changelog: https://pyup.io/changelogs/scikit-learn/ - Homepage: http://scikit-learn.org

Update h5py from 3.4.0 to 3.6.0.

Changelog
Links - PyPI: https://pypi.org/project/h5py - Changelog: https://pyup.io/changelogs/h5py/ - Homepage: http://www.h5py.org

Update zarr from 2.10.1 to 2.10.3.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/zarr - Repo: https://github.com/zarr-developers/zarr-python

Update pomegranate from 0.14.5 to 0.14.7.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/pomegranate - Homepage: http://pypi.python.org/pypi/pomegranate/

Update ipython from 7.28.0 to 7.30.0.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/ipython - Changelog: https://pyup.io/changelogs/ipython/ - Homepage: https://ipython.org
pyup-bot commented 2 years ago

Closing this in favor of #373