output_filename_prefix is needed for mito pipeline

chopdgd / bfx-tools-wdl

WDL tasks for commonly used BFX tools

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Closed Tayazseven closed 4 years ago

Tayazseven commented 4 years ago

Dear Maintainers,

Please accept this PR that addresses the following issues:

output_filename_prefix is needed to differentiate 2 different novoalign bam files. The bam file for CNV calculation will be called "shifted" check here