WDL Tasks for Bioinformatics tools

Standard tasks to run Bioinformatics tools using WDL

How to run?

Make sure you use Cromwell version 35 and above

How to use?

In your wdl workflows you can import directly like:

import "<url/to/raw/file.wdl" as ToolName

Contributing??

If you plan to contribute, make sure to activate our pre-commit hooks to validate changes to WDL by running:

make setup-githooks