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DiagnosticReport ->
evtl erben vom MolGen -Befundbericht
Die einzelnen Resultate (Varianten + Biom…
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Hello, I get an error when making ngs-tools: fatal error: ngs/ncbi/NGS.hpp: No such file or directory
Here is my make output. Where can I find NGS.hpp?
make
cd /root/ncbi-outdir/ngs-tools/linux…
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Vcflib `vcfbreakmulti` doesn't handle annotations correctly during splitting
- [x] create megSAP test for this error (e.g. calling on the extracted region of DNA2106177 shown below)
- [x] test if …
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Fehlt im NGS_Bericht nicht noch DNA-Fusion (und Ploidie)? Es ist zwar mit einem Pfeil verlinkt aber nicht aufgeführt.
Vielleicht verstehe ich auch nicht die Bedeutung der Pfeile. Dann wäre ich für…
milah updated
1 month ago
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Heya,
This tool looks really cool. I'm trying to run it on some 10x scATAC data generated with cellranger atac 2.0.1. here is the command and directory I'm trying to run it in, and error I encounte…
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make bowtie2-build-s USE_SAIS_OPENMP=1
[ 18%] Built target libsais_project
[ 36%] Built target ncbi_vdb_project
[ 59%] Built target ngs_project
[ 59%] Building CXX object CMakeFiles/bowtie2-buil…
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郑老师，您好！我是一个家系罕见病例5个个体的的图形基因组，使用minigraph_cactus构建的得到的。同时运行minigraph_cactus管道输出一个VCF文件，里边包含5个个体的变异信息。
首先，我想对这个vcf文件是筛选，按照家系遗传模式比如隐性遗传筛选候选SV变异。接着，把候选SV变异在其他二代测序的散发病例或家系病例或正常个体中进行SV基因分型，寻找患者特有的SV变异。我的这个…
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### Description of bug
system call for: "['/home/MegaBOLT/anaconda3/envs/spades_env/bin/spades-core', '/storeData/wjw/NGS/FXS-NGS/1010/P1/spades_output/K77/configs/config.info']" finished abnormally,…
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[2024-10-30 10:47:08] Download and install all the dependencies ...
[2024-10-30 10:47:08] Installing Perl modules ...
cp: cannot stat '/home/lei/project/NGS/Varathon/misc/cpanm': No such file or d…
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I tried to install "RcppPlanc" with: install.packages("RcppPlanc", repos = "https://welch-lab.r-universe.dev"), but the output shows an error. It seems there might be an issue with the "hdf5" library,…