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clairelbromley
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ZebrafishKymographing
Various software tools written for analysis of lumen opening and membrane retraction in zebrafish.
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Import manually determined scatter frames into subsequent analysis
#23
dougkelly88
opened
8 years ago
0
apical_surface_distance_to_cut_1.csv file
#22
clairelbromley
opened
8 years ago
0
Selection of frames for looking at 4 s post laser cut
#21
clairelbromley
opened
8 years ago
3
Navigation through kymographs in viewer with arrow keys doesn't work
#20
dougkelly88
closed
8 years ago
1
Import user QC labelling from exported data
#19
dougkelly88
closed
8 years ago
1
User-directed edge finding
#18
dougkelly88
closed
7 years ago
1
Instead of kymographs, plot recoil velocity against time over 10s
#17
dougkelly88
closed
7 years ago
1
Manual scattered light removal
#16
dougkelly88
closed
8 years ago
4
Can we identify what side of the membrane the edge has been drawn on?
#15
dougkelly88
closed
8 years ago
2
Manual edge finding and characterisation of kymograph edges
#14
dougkelly88
closed
8 years ago
2
Data export wizard output
#13
clairelbromley
closed
7 years ago
2
(MINOR) Display of fitted line speeds
#12
clairelbromley
closed
7 years ago
0
Unable to import inclusion data
#11
clairelbromley
closed
7 years ago
1
Change quantitative analysis so that elongation (imdilate/imerode) is only performed for normal lumen opening (slow) data
#10
dougkelly88
closed
8 years ago
0
(LONG TERM) Apical cuts: retraction on AP axis
#9
clairelbromley
closed
7 years ago
1
(HIGH) Detected edge overlay in wrong position
#8
clairelbromley
closed
8 years ago
1
(HIGH) Detected edge overlay in wrong position
#7
clairelbromley
closed
8 years ago
0
(LOW) Change description text at top of testCutPositioningSlow
#6
dougkelly88
opened
8 years ago
0
(LOW) Unable to find settings to change cross sizes on tif files
#5
clairelbromley
closed
7 years ago
2
Unknown error
#4
clairelbromley
closed
7 years ago
2
(HIGH PRIORITY) Files crashing matlab viewer: google drive folder number 1
#3
dougkelly88
closed
7 years ago
1
!! (HIGH) Overlay detected membrane edge
#2
dougkelly88
closed
7 years ago
1
(LOW) Missing data point on final graph
#1
dougkelly88
opened
8 years ago
0
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