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cnobles
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iGUIDE
Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9.
https://iguide.readthedocs.io/en/latest/
GNU General Public License v3.0
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Position Range to accompany Position IDs
#35
cnobles
closed
5 years ago
1
Update v0.9.6
#34
cnobles
closed
5 years ago
0
Update v0.9.6
#33
cnobles
closed
5 years ago
0
Update v0.9.6
#32
cnobles
closed
5 years ago
0
Update v0.9.5
#31
cnobles
closed
5 years ago
0
Cas9-centric, expand method for other nucleases
#30
cnobles
closed
5 years ago
1
Digest test and updated build to v0.9.3.
#29
cnobles
closed
5 years ago
0
Update to v0.9.4
#28
cnobles
closed
5 years ago
0
Add protected words to supp. info files
#27
cnobles
opened
5 years ago
0
Update docs
#26
cnobles
closed
5 years ago
1
Update to version 0.9.3, including the list_samples subcommand.
#25
cnobles
closed
5 years ago
0
Update test and version to 0.9.2.
#24
cnobles
closed
5 years ago
0
Include additional subcommands
#23
cnobles
opened
5 years ago
4
Setup circleCI testing.
#22
cnobles
closed
5 years ago
0
cli
#21
cnobles
closed
5 years ago
0
Generic pull request message
#20
kevinmcc21
closed
5 years ago
0
New cmdline interface for easier use
#19
cnobles
closed
5 years ago
1
Implementation of processing stat reporting.
#18
cnobles
closed
5 years ago
0
Docs
#17
cnobles
closed
5 years ago
0
Docs
#16
cnobles
closed
5 years ago
0
v0.2.4 - update to install and test scripts
#15
cnobles
closed
5 years ago
0
Updated bin/install.sh to set install directory dynamically
#14
kevinmcc21
closed
5 years ago
0
Create CODE_OF_CONDUCT.md
#13
cnobles
closed
5 years ago
0
Updated install.sh to use install directory
#12
kevinmcc21
closed
5 years ago
0
Issues exist with alignment counts
#11
cnobles
closed
5 years ago
1
Minor bug fix.
#10
cnobles
closed
6 years ago
0
Incorporate option for multihits to be used in analysis.
#9
cnobles
closed
6 years ago
0
Fill in missing sections of READ.MEs
#8
cnobles
closed
5 years ago
2
Add annotation to incorporation distribution plot in report
#7
cnobles
closed
6 years ago
1
Primer and dsODN bit trimming separately.
#6
cnobles
closed
6 years ago
0
Separate trimming for primer and dsODN bit sequences.
#5
cnobles
closed
6 years ago
0
Add support for randomID capture
#4
cnobles
closed
6 years ago
1
Items to add to general run report.
#3
cnobles
closed
5 years ago
5
hiAnnotator package not found.
#2
cnobles
closed
6 years ago
1
Find method to pass configfile path into rule
#1
cnobles
closed
6 years ago
1
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