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Ticketing system for developers/testers and power users of the Brain Simulation Platform of the Human Brain Project
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No images for cerebellum models in the platform #443

Closed alex4200 closed 5 years ago

alex4200 commented 5 years ago

Expected behavior

When selecting a cerebellum/purkinje model I expect to see an image of the responses and the morphology.

Actual Behavior (please include screenshot if possible)

No image is provided for the following three models:

Selection_725

Steps to reproduce the problem

  1. Select "Single Cell In Silico Experiments" use case
  2. Type "cerebellum" in the search box.

Optional infrastructural data (user, platform, browser, environment, ...)

SteMasoli commented 5 years ago

Hi. Some weeks ago, i have added the missing images directly into the model catalog entries. Is there something else to do to have them in the BSP?

Purkinje https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.d3a1a6f7-d4c6-4e4a-b1d8-76e470f20862

Multi GrC https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.0c97cd83-24fd-4782-bdea-2affacc6863e

Mono GrC https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.527191ca-8385-4aac-b08c-3bce022fc5cc

appukuttan-shailesh commented 5 years ago

@SteMasoli : the issue arises because BSP tools require the model entries to have images with captions (names) as 'Morphology' and 'Responses` as discussed here.

Example: https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.579cf0d8-62d0-49a1-891d-d16dbc06146a

SteMasoli commented 5 years ago

I have reuploaded the images, for the three models, with the required captions. https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.d3a1a6f7-d4c6-4e4a-b1d8-76e470f20862

In the "Single Cell In Silico Experiments" are not yet visible.

antonelepfl commented 5 years ago

@SteMasoli I see that the Purkinje cell has the images now and it's available on the BSP.

Now I have another question. In the past we were choosing the Granule cells for Mouse and now you don't have any of them but you have for Rat instead. Can you confirm that you want to show for BlueNaaS only these 2 granulle models + the Purkinje cell?

SteMasoli commented 5 years ago

The old granule cells have images too.

https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.0c97cd83-24fd-4782-bdea-2affacc6863e

https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.527191ca-8385-4aac-b08c-3bce022fc5cc

@antonelepfl

Can you confirm that you want to show for BlueNaaS only these 2 granulle models + the Purkinje cell?

Yes plus the 4 new "Granule cells 2019" models. They are based on rats, are part of the live paper, in BlueNaaS format too, but still missing some description and images in the model catalog.

For example. https://collab.humanbrainproject.eu/#/collab/19/nav/369318?state=model.6f4f624e-a971-4708-ab99-a822b7f3e2a6

SteMasoli commented 5 years ago

Added descriptions and images for the four granule cells 2019.

antonelepfl commented 5 years ago

Now you can see the latest modes of Granule Cells working with BlueNaaS in [DEV] (https://collab.humanbrainproject.eu/#/collab/8444/nav/65635) the images are shown but some of them are quite big so if you can reduce the size to keep consistency that would be good.