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coderefinery
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reproducible-research
Reproducible research - Preparing code to be usable by you and others in the future
https://coderefinery.github.io/reproducible-research/
Creative Commons Attribution 4.0 International
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Github does not have a "releases" tab any more
#164
wikfeldt
closed
3 years ago
1
Step 4 in Exercise: "Get a DOI by connecting you repository to Zenodo"
#163
NMoksnes
closed
2 years ago
1
Update 04-workflow-management.md
#162
ThomasA
closed
3 years ago
1
Do not require `dot` to work/ be available
#161
bast
closed
2 years ago
1
Mention enviroment.yml instead of requirements.txt
#160
johanhellsvik
closed
3 years ago
2
Mention environment.yml instead of requirements.txt
#159
johanhellsvik
closed
3 years ago
1
Add missing switch to exercise on 03-dependencies.md
#158
manuGil
closed
3 years ago
1
Missing switch -n in exercise: exploring conda environments
#157
manuGil
closed
3 years ago
0
Extended exercise preparations
#156
johanhellsvik
closed
3 years ago
3
Mention Fortran Package Manager
#155
johanhellsvik
closed
3 years ago
2
Mention Fortran Package Manager
#154
johanhellsvik
closed
3 years ago
1
Revised conda environment exercise
#152
johanhellsvik
closed
3 years ago
0
julia package/environment management
#151
wikfeldt
closed
3 years ago
0
port lesson to sphinx-lesson
#150
wikfeldt
closed
2 years ago
2
Added Docker analogy
#149
johanhellsvik
closed
3 years ago
0
Updated instructor guide on the snakemake episode
#148
johanhellsvik
closed
3 years ago
0
Mention snakemake clean output command
#147
johanhellsvik
closed
3 years ago
0
Links to install of docker and make are broken
#146
johanhellsvik
closed
2 years ago
4
remove TSD from 06-sharing.md
#145
korbinib
closed
3 years ago
1
Citing & publishing software: Publishing research software
#144
bast
closed
3 years ago
1
Mention fair-software.eu
#143
johanhellsvik
closed
3 years ago
0
Mention devtools
#142
johanhellsvik
closed
3 years ago
0
Mentionhackmd
#141
johanhellsvik
closed
3 years ago
0
cognitive overload when this lesson taught before mybinder is introduced in Jupyter lesson
#140
wikfeldt
closed
2 years ago
1
add https://manuscripts.io as tool for "reproducible publications"
#139
wikfeldt
closed
3 years ago
0
add hackMD as "reproducible publications" tool
#138
wikfeldt
closed
3 years ago
0
optional conda snakemake solutions
#137
samumantha
closed
3 years ago
1
Switch episodes
#136
annefou
closed
3 years ago
1
snakemake exercise solution
#135
samumantha
closed
3 years ago
0
windows equivalent for touch added
#134
samumantha
closed
4 years ago
1
snakemake exercise instructions
#133
samumantha
closed
4 years ago
2
Snakemake - solutions (helper help)
#132
samumantha
closed
3 years ago
5
Can't install word-count environment from requirements.txt
#131
bast
closed
2 years ago
3
Snakemake example assumes bash
#130
bast
closed
3 years ago
4
Link fair-software.eu somewhere
#129
rkdarst
closed
3 years ago
0
Exercise says to clean output but does not show how
#128
bast
closed
3 years ago
2
small fix in jekyll-common: load mathjax over https
#127
bast
closed
4 years ago
0
Following Docker instructions causes error with snakemake
#126
pjehkonen
closed
1 year ago
2
Snakemake exercise is possibly not clear enough
#125
bast
closed
2 years ago
1
The snakemake script is written for bash and does not work with the standard Windows shell?
#124
bast
closed
3 years ago
1
Tiny typo fixed (rrtools)
#123
matuskalas
closed
4 years ago
1
add comment about --cores flag to snakemake, fixes #117
#122
wikfeldt
closed
4 years ago
3
mixed updates
#121
wikfeldt
closed
4 years ago
5
reorder episodes for better discussion/exercise balance
#120
wikfeldt
closed
4 years ago
1
swap sections for better story
#119
wikfeldt
closed
4 years ago
0
How to convert Docker to Singularity
#118
bast
closed
1 year ago
0
snakemake will now require --cores=N
#117
rkdarst
closed
4 years ago
0
Add hint on `touch` command in exercise
#116
rkdarst
closed
4 years ago
1
mv exercises to after theory sections
#115
wikfeldt
closed
4 years ago
0
update snakemake episode
#114
wikfeldt
closed
4 years ago
1
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