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compSPI
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simSPI
Generative Models
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Toggling "h5_file_noisy" addition to output_path_dict based on config params.
#83
calhep
opened
2 years ago
0
Tem/ctf params
#82
arjunsingh3600
closed
2 years ago
2
Basic metadata generation and PR #79 fixes
#81
calhep
closed
2 years ago
1
Refactoring simSPI
#80
fredericpoitevin
opened
2 years ago
0
Fix: appropriate slicing of stack
#79
jedyeo
closed
2 years ago
3
TEM wrapper is not updated
#78
luis-sribeiro
closed
2 years ago
2
Implement membrane protein belt simulations
#77
ninamiolane
opened
2 years ago
2
Write tutorial notebooks for simSPI
#76
ninamiolane
opened
2 years ago
1
Update Docker Image to Reflect ioSPI Refactoring
#75
thisFreya
closed
2 years ago
2
Add utils to handle simulation parameters (including distributional parameters) in linear simulator: rotations, shifts, CTF
#74
harshit-gupta-cor
closed
2 years ago
4
Param utils updated
#73
harshit-gupta-cor
closed
2 years ago
0
Simulator volume utils
#72
harshit-gupta-cor
closed
2 years ago
0
Param utils
#71
harshit-gupta-cor
closed
2 years ago
4
Tidy up environments.
#70
fredericpoitevin
opened
2 years ago
0
Workflow documentation
#69
fredericpoitevin
opened
2 years ago
0
Simulator volume utils
#68
fredericpoitevin
closed
2 years ago
2
Simulator volume utils
#67
harshit-gupta-cor
closed
2 years ago
1
Multislice compSPI fft
#66
geoffwoollard
closed
2 years ago
10
Refactoring
#65
thisFreya
closed
2 years ago
6
Environment recipe for Mac.
#64
fredericpoitevin
closed
2 years ago
2
Fix asynchronous testing in container.
#63
fredericpoitevin
closed
2 years ago
5
Still trying to fix test_tem.py
#62
fredericpoitevin
closed
2 years ago
2
Branch from upstream: Adapt simSPI following ioSPI's refactoring
#61
ninamiolane
closed
2 years ago
0
Adapt simSPI following ioSPI's refactoring
#60
ninamiolane
closed
2 years ago
0
Error when creating conda environment from .yml file
#59
ninamiolane
closed
2 years ago
8
Worflow split2
#58
fredericpoitevin
closed
2 years ago
0
Adding usage tutorial and files related to it
#57
luis-sribeiro
closed
2 years ago
43
Tem ctf params
#56
thisFreya
closed
2 years ago
1
TEM fix generation
#55
calhep
closed
2 years ago
0
Implements tem wrapper metadata functions.
#54
thisFreya
closed
2 years ago
0
projector module with the right dependencies
#53
harshit-gupta-cor
closed
2 years ago
7
Keeping track of python version in test
#52
fredericpoitevin
opened
2 years ago
0
Decoupled linting and testing, and updated badges in README.
#51
fredericpoitevin
closed
2 years ago
3
Containerization workflows
#50
fredericpoitevin
closed
2 years ago
1
generate initial datasets available with simSPI
#49
geoffwoollard
opened
2 years ago
4
Run TEM simulator tests in container.
#48
fredericpoitevin
closed
2 years ago
2
Tem with install dependancies
#47
arjunsingh3600
closed
2 years ago
10
Automatic assignment of reviewers for upcoming PRs.
#46
fredericpoitevin
closed
2 years ago
3
solve pytorch3d dependency issue - platform dependence
#45
harshit-gupta-cor
closed
2 years ago
6
Tem wrapper metadata
#44
thisFreya
closed
2 years ago
0
Gaussian noise
#43
thisFreya
closed
2 years ago
0
Add tem wrapper helpers
#42
arjunsingh3600
closed
2 years ago
2
Tem wrapper helpers
#41
arjunsingh3600
closed
2 years ago
0
ctf_freq shape mismatch
#40
geoffwoollard
closed
2 years ago
2
Revert "Feature: adding helper functions from SLAC"
#39
arjunsingh3600
closed
2 years ago
2
test_projector failing
#38
harshit-gupta-cor
closed
2 years ago
4
`test_eval_ctf` fails for python 3.7
#37
fredericpoitevin
closed
2 years ago
8
projector module on the correct commit of the base branch
#36
harshit-gupta-cor
closed
2 years ago
5
helper functions to sample ctf parameters (for tem simulator and other simulators)
#35
geoffwoollard
opened
2 years ago
7
add white gaussian noise to clean tem simulator outputs
#34
geoffwoollard
closed
2 years ago
5
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