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compbio-UofT
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medsavant
MedSavant is a search engine for genetic variants
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Create 1 minute video tutorials for basic usage of MedSavant
#253
mfiume
closed
10 years ago
1
Database not locked when background process is happening (e.g. during import or removal of variants)
#252
mfiume
opened
10 years ago
0
CGD updating hangs and delays startup
#251
ronammar
closed
10 years ago
3
Mendel errors out
#250
jvlasblom
closed
10 years ago
0
No way to exit certain wizards in debian linux
#249
jvlasblom
opened
10 years ago
0
can't install custom annotations on new server instance
#248
jvlasblom
closed
10 years ago
0
client/server RMI encryption
#247
jvlasblom
closed
10 years ago
2
No variant annotation for vcfs stored on server
#246
jfoong
opened
10 years ago
0
Duplicate key errors when toggling references, autopublish broken
#245
jvlasblom
opened
10 years ago
0
Database lock not released when publishing project changes
#244
jvlasblom
opened
10 years ago
0
Enable the Clirr plugin to monitor API breakages
#243
sdumitriu
closed
10 years ago
0
Make individuals importing transactional
#242
mfiume
opened
10 years ago
0
Enrichment app should not start until explicitly told to
#241
mfiume
opened
10 years ago
1
The numbers indicating the number of genes per HPO term don't always show
#240
mfiume
opened
10 years ago
0
Detect unsorted VCF files upon import and sort if necessary
#239
mfiume
closed
10 years ago
1
The spreadsheet progress ring sometimes shows 100% of varians remain when it's not true.
#238
mfiume
opened
10 years ago
0
Table panel should show NULL integer values as blank, not 0
#237
mfiume
closed
10 years ago
1
Test background session keeping
#236
mfiume
opened
10 years ago
0
Add an option to "Include empty values" to numeric condition editor
#235
mfiume
closed
10 years ago
0
Session should not expire if autopublish is not checked when removing variants
#234
mfiume
opened
10 years ago
0
InvocationTargetException
#233
mfiume
closed
10 years ago
2
Make sure database is locked during all background jobs that alter tables
#232
mfiume
opened
10 years ago
1
Complain when importing variants not karyotipically ordered
#231
mfiume
closed
10 years ago
0
disk filling up
#230
jvlasblom
closed
10 years ago
0
Ontology creation thread should block
#229
jvlasblom
opened
10 years ago
3
Errors initializing new databases with ontology
#228
jvlasblom
opened
10 years ago
2
MedSavant should notify Apps when it quits
#227
jvlasblom
opened
10 years ago
0
Automatically import VCFs from a specific directory on the server
#226
mfiume
opened
10 years ago
0
Don't skip variants on non canonical chromosomes
#225
mfiume
opened
10 years ago
0
Try to preserve filename of VCF files transferred to the server on import
#224
mfiume
closed
10 years ago
1
Include date stamps in log files
#223
mfiume
closed
10 years ago
1
Error dumping table to disk when importing new VCF
#222
mfiume
opened
10 years ago
0
Medsavant admins can access all databases
#221
jfoong
opened
10 years ago
1
Delete tmp files used for loading / annotating data
#220
mfiume
opened
10 years ago
0
Send emails through web service, not internally
#219
mfiume
closed
10 years ago
1
Don't run out of file handles when performing annotations
#218
mfiume
opened
10 years ago
0
HGMD annotations (private), and incorporate in the Variant Inspector
#217
mfiume
opened
10 years ago
1
Incorporate ClinVar into Variant Inspector
#216
mfiume
closed
10 years ago
1
Add back support for automatic plugin updating
#215
mfiume
opened
10 years ago
0
Move plugins and xml to production site
#214
mfiume
closed
10 years ago
1
Consolidate plugin xml URLs
#213
mfiume
opened
10 years ago
1
Problem adding users
#212
mfiume
opened
10 years ago
0
Clicking gene tab does not show gene info
#211
jvlasblom
closed
10 years ago
2
Encrypt RMI communications
#210
jvlasblom
opened
10 years ago
0
When clicking on patients "tet" printed to stdout
#209
ronammar
opened
10 years ago
1
Select DNA ID from dropdown when creating patient
#208
ronammar
opened
10 years ago
0
Display DNA ID for each variant file
#207
ronammar
opened
10 years ago
0
Annotating DB with 6500exome throws Exception
#206
ronammar
closed
10 years ago
1
MedSavant closes after DB import or mod is complete
#205
ronammar
opened
10 years ago
1
Updating the IndividualSelector after adding patients
#204
ronammar
closed
10 years ago
0
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