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compomics
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ms2pip
MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
https://ms2pip.readthedocs.io
Apache License 2.0
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Bump cython from 0.29.17 to 0.29.18
#76
dependabot-preview[bot]
closed
4 years ago
0
Bump deeplc from 0.1.14 to 0.1.16
#75
dependabot-preview[bot]
closed
4 years ago
0
Bump deeplc from 0.1.14 to 0.1.15
#74
dependabot-preview[bot]
closed
4 years ago
1
Bump sqlalchemy from 1.3.16 to 1.3.17
#73
dependabot-preview[bot]
closed
4 years ago
0
Bump pytest from 5.4.1 to 5.4.2
#72
dependabot-preview[bot]
closed
4 years ago
1
Bump tensorflow-estimator from 2.1.0 to 2.2.0
#71
dependabot-preview[bot]
closed
4 years ago
0
Publish to PyPI action: package source distribution step fails
#70
RalfG
closed
4 years ago
0
Bump version to 3.6.2
#69
RalfG
closed
4 years ago
0
Feature: fix log formatting issues
#68
RalfG
closed
4 years ago
0
Bump tqdm from 4.45.0 to 4.46.0
#67
dependabot-preview[bot]
closed
4 years ago
0
Bump numpy from 1.18.2 to 1.18.4
#66
dependabot-preview[bot]
closed
4 years ago
0
Error when running ms2pip in the linux terminal
#65
MarcIsak
closed
4 years ago
1
Formatting error when printing correlations
#64
RalfG
closed
4 years ago
0
Bump cython from 0.29.16 to 0.29.17
#63
dependabot-preview[bot]
closed
4 years ago
0
Duplicate modifications cause crashes
#62
paretje
opened
4 years ago
0
Improve handling very large amounts of peptides: make merging step more efficient, implement batches
#61
MarcIsak
opened
4 years ago
1
opt parameter in config file
#60
MarcIsak
closed
4 years ago
2
Bump numpy from 1.18.2 to 1.18.3
#59
dependabot-preview[bot]
closed
4 years ago
1
Update GitHub actions
#58
RalfG
closed
4 years ago
0
fix average mass in fasta2speclib config
#57
RalfG
closed
4 years ago
0
fasta2speclib: Allow PEFF or UniProt PTMs input
#56
RalfG
opened
4 years ago
0
Hotfix: fasta2speclib fix params
#55
RalfG
closed
4 years ago
0
Use upload-artifact@v2, when released. Now using v2-preview
#54
RalfG
closed
4 years ago
1
Version bump
#53
RalfG
closed
4 years ago
0
Add blib converter
#52
paretje
closed
4 years ago
0
Fix and refactor speclib_to_mgf
#51
RalfG
closed
4 years ago
0
add sqldb backed spectrum matching
#50
paretje
closed
4 years ago
0
fix invocation of spectrum output write functions
#49
paretje
closed
4 years ago
0
Add generic write function and some fixes
#48
paretje
closed
4 years ago
1
WIP: Match predicted spectra to observed spectra
#47
paretje
closed
4 years ago
0
Implement DeepLC
#46
RalfG
closed
4 years ago
0
Version bump
#45
RalfG
closed
4 years ago
0
Add headers to manifest
#44
RalfG
closed
4 years ago
0
Feature/prepare release
#43
RalfG
closed
4 years ago
0
delete archive and binaries
#42
paretje
closed
4 years ago
0
Refactored spectrum_output module
#41
RalfG
closed
4 years ago
0
add pyproject.toml
#40
paretje
closed
4 years ago
0
fix logging of writing CSV files
#39
paretje
closed
4 years ago
0
Use exceptions
#38
paretje
closed
4 years ago
0
add option to use billiard
#37
paretje
closed
4 years ago
0
Refactoring
#36
paretje
closed
4 years ago
0
fasta2speclib spectronaut format does not include a ProteinId column
#35
fburic
closed
4 years ago
2
Merge all changes from master branch
#34
RalfG
closed
4 years ago
0
C memory errors
#33
bittremieux
closed
5 years ago
3
Incorrect modification format in instructions
#32
bittremieux
closed
5 years ago
1
Negative predicted intensities?
#31
wyu
closed
5 years ago
2
ms2pip_tools folder not installed
#30
tuxmaster5000
closed
5 years ago
1
Install step fails
#29
tuxmaster5000
closed
5 years ago
0
Currently broken
#28
rohan-shah
closed
5 years ago
1
Stop removing spaces from mgf TITLE (can lead to issues)
#27
anasilviacs
closed
6 years ago
0
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