Set of Octave and Matlab functions, demos and scripts to help manage ROIs and to play nice with BIDS datasets.
Mostly volume-based and SPM centric.
For surface based and freesurfer ROIs see for example:
Download this repository and unzip the content where you want to install it.
Or clone the repo.
git clone https://github.com/cpp-lln-lab/CPP_ROI.git
Fire up Octave or Matlab and type
cd CPP_ROI
% The following adds the relevant folders to your path.
% This needs to be done once per session (your path will not be saved)
initCppRoi
If you are using CPP_SPM, you got nothing to do as CPP_ROI is already installed
as a submodule, and initialized when running initCppSpm
.
Dependencies | Used version |
---|---|
Matlab | 20??? |
or octave | 4.? |
SPM12 | v7487 |
bids-matlab | >=0.1.0 |
lib
folder.Also includes: