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cvxgrp
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pymde
Minimum-distortion embedding with PyTorch
https://pymde.org
Apache License 2.0
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Surprisingly structured academic network embedding
#80
VladimirShitov
opened
1 month ago
1
Error while plotting graph
#79
fikranltd
opened
3 months ago
1
Is there an easy way to use Standardized() constraint with target std not equal to 1?
#78
dkobak
opened
8 months ago
1
advice on scaling
#77
bkmartinjr
opened
1 year ago
0
incompatibility with PyTorch 2.0?
#76
PierreBoyeau
closed
1 year ago
2
poetry installation "Unable to find installation candidates for nvidia-cudnn-cu11"
#73
ErrorUnknown88
opened
1 year ago
6
Fix 3D plotting
#70
akshayka
closed
1 year ago
0
Build Fixes: Build arm64 wheels for macos, more robust build isolation for numpy
#69
akshayka
closed
1 year ago
0
torch.svd -> torch.linalg.svd, don't use X for U storage
#68
akshayka
closed
1 year ago
0
scikit-learn compatible API
#67
koaning
opened
1 year ago
4
Conflict with sklearn.manifold.TSNE
#66
kevinsweeney84
closed
1 year ago
2
Using pre-computed knn with preserve_neighbors
#65
jlmelville
opened
1 year ago
5
Distortion functions on the embedded positions?
#64
slinnarsson
opened
2 years ago
0
Add different metrics to compute KNN
#63
SSamDav
opened
2 years ago
0
Implement default embeddings
#62
SSamDav
opened
2 years ago
0
Fixing command line install typo
#61
angeris
closed
2 years ago
1
Incorrect conda command on installation page
#60
angeris
closed
2 years ago
1
fix anchor device, fix spectral bugs
#59
akshayka
closed
2 years ago
0
Updating embeddings Notebook - doesnt work
#58
TobiasKonradsen
closed
2 years ago
3
[Question] Possible to invert embedding?
#57
pkmital
opened
2 years ago
1
updated black to stable, ran
#56
akshayka
closed
2 years ago
0
Use torch when possible for quadratic initialization
#55
adamgayoso
closed
2 years ago
13
Quadratic initialization on GPU
#54
adamgayoso
closed
2 years ago
2
Implement pymde in Scanpy
#53
adamgayoso
opened
2 years ago
3
SolverError after using Standardized constraint
#52
cowjen01
opened
2 years ago
2
Continuous color bar for categorical variables
#51
kyleford8
closed
2 years ago
4
Adding or removing one sample results in absolutely different embeddings
#50
cowjen01
opened
2 years ago
1
Could not find a `llvm-config` binary on Mac M1
#49
eleonoravercesi
opened
2 years ago
3
Error when embedding new points
#48
actrina
closed
2 years ago
2
build.yaml: cibuildwheel -> 2.3.0
#47
akshayka
closed
2 years ago
0
Fix anchored preserve_neighbors on cuda
#46
frederikschubert
closed
2 years ago
0
API for controlling randomness
#45
akshayka
closed
2 years ago
0
sklearn-intelex integration
#44
pkmital
opened
2 years ago
1
Setting random seed
#43
ltsypin
closed
2 years ago
9
Nearest Neighbor edges are not consistent between runs
#42
jstankowicz
closed
2 years ago
8
build with numpy 1.19 on python 3.9
#41
akshayka
closed
3 years ago
0
address pytorch 1.9 deprecations (symeig, //)
#40
akshayka
closed
3 years ago
0
warning message from pytorch
#39
ivan-marroquin
closed
3 years ago
3
limit memory usage in _remove_anchor_anchor_edges
#38
kruus
closed
2 years ago
4
does pymde support time series data?
#37
ghost
opened
3 years ago
1
Fixes #35. Correcting minor typo in documentation example
#36
theresekoch
closed
3 years ago
0
[docs] Update example in documentation
#35
theresekoch
closed
3 years ago
2
PyMDE getting stuck on "Computing quadratic initialization"
#34
fsaghir
closed
3 years ago
7
does pymde handle missing data?
#33
turmeric-blend
closed
3 years ago
3
[Feature] Other distances besides Euclidean
#32
akshayka
opened
3 years ago
4
[Feature] Multiple constraints on mutually exclusive sets of items
#31
akshayka
opened
3 years ago
0
Do not create edges between anchors
#30
akshayka
closed
3 years ago
0
fix anchor initialization in preserve_neighbors
#29
akshayka
closed
3 years ago
0
graph kNN: do not recompute shortest paths on dense graph
#28
akshayka
closed
3 years ago
0
Starting MDE from distances or affinities?
#27
davisidarta
closed
3 years ago
9
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