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cytomining
/
profiling-handbook
Image-based Profiling Handbook
https://cytomining.github.io/profiling-handbook/
Creative Commons Zero v1.0 Universal
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also build before deploying
#25
gwaybio
closed
5 years ago
0
add bash deploy
#24
gwaybio
closed
5 years ago
0
Add chmod to deploy in travis conditional build
#23
gwaybio
closed
5 years ago
2
Updating travis yml to only deploy on master branch
#22
gwaybio
closed
5 years ago
0
fix terraform config url
#21
gwaybio
closed
5 years ago
0
Conditional Travis Build
#20
gwaybio
closed
5 years ago
9
Add folder notes
#19
shntnu
closed
5 years ago
3
Add note about pe2loaddata's handling of channel names
#18
shntnu
closed
5 years ago
0
specify exact list of CSV files to stack
#17
shntnu
closed
5 years ago
1
Use cellprofiler/cellprofiler:2.3.1 docker
#16
shntnu
closed
5 years ago
9
Update 03-setup-pipelines.Rmd
#15
shntnu
closed
5 years ago
1
dcp_config troubleshooting
#14
shntnu
closed
5 years ago
0
[WIP] Update docs
#13
shntnu
closed
5 years ago
0
Add notes of caution
#12
shntnu
closed
6 years ago
0
Cleanup instructions
#11
shntnu
closed
6 years ago
0
Change docker from shntnu 2.2.1 to cellprofiler 2.3.1
#10
shntnu
closed
5 years ago
0
BUCKET should be a variable
#9
shntnu
closed
5 years ago
1
Specify that for DCP CSVs need to be synced back to S3
#8
bethac07
closed
5 years ago
0
Use temp dir flag when making CSVs
#7
bethac07
closed
2 years ago
5
Have a programmatic way to make plate names before making CSVs
#6
bethac07
closed
5 years ago
2
Add Travis badge and link to bookdown
#5
shntnu
closed
6 years ago
0
Specify that you need to clone DCP if you're going to set it up
#4
bethac07
closed
5 years ago
1
Specify that most steps should be done in a tmux or screen session
#3
bethac07
closed
2 years ago
0
Add instructions to compile QC results
#2
shntnu
closed
2 years ago
0
generate variable PLATES without file plates_to_process.txt
#1
cells2numbers
closed
4 years ago
1
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