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cytoscape / cyREST

Core App: REST API module for Cytoscape
https://github.com/cytoscape/cyREST/wiki
MIT License
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JAX-RS Warnings in cytoscape logs #34

Closed dotasek closed 6 years ago

dotasek commented 6 years ago

The jersey server produces warnings regarding JAX-RS annotated classes registered with CyREST. None of these go beyond Warnings, but they do produce chatter in the log files:

org.glassfish.jersey.internal.Errors - The following warnings have been detected: WARNING: Parameter taskManager of type org.cytoscape.work.SynchronousTaskManager<?> from private org.cytoscape.work.SynchronousTaskManager<?> org.cytoscape.rest.internal.commands.resources.CommandResource.taskManager is not resolvable to a concrete type. WARNING: Parameter taskManager of type org.cytoscape.work.SynchronousTaskManager<?> from protected org.cytoscape.work.SynchronousTaskManager<?> org.cytoscape.rest.internal.resource.apps.clustermaker2.ClusterMaker2Resource.taskManager is not resolvable to a concrete type. WARNING: The (sub)resource method getTables in org.cytoscape.rest.internal.resource.TableResource contains empty path annotation. WARNING: The (sub)resource method createNetworkView in org.cytoscape.rest.internal.resource.NetworkViewResource contains empty path annotation. WARNING: The (sub)resource method deleteAllNetworkViews in org.cytoscape.rest.internal.resource.NetworkViewResource contains empty path annotation.

dotasek commented 6 years ago

Fixed in 9040576be39cbd9f8495c3e6588dc0adf45b875e

Related issues have been created for core apps:

https://github.com/cytoscape/diffusion/issues/33 https://github.com/cytoscape/copycat-layout/issues/2

Awaiting release.